Pseudomonas mosselii DSM 17497, Q380_RS0127755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mosselii DSM 17497 Q380DRAFT_scaffold00009.9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCTCATTGCCTTGATCCAGGTGAGCACCGGCGTCCTGCTGCTGGCGCCCTGGGTGCAACTGGGCGGGCTGCCGGGTGAACTGCCGGCGCTTGGCAGCCT GGTCACGCTGGGCATCTTGCATACGGGGTTGATGTACGTGCTGCTGTACAGCGCCATCCAGCGCCTGCCAACGGCGTTGACCGGAGCGCTGTCGTTCATC TACCCGATCGCCGCGATCCTGGTCGACTGGCTGGCCTTCGACCATCGCCTGGCAGCATTGCAGTGGTTGGGAGTCGGGCTGATTCTGCTCGCTGCTGCCG GCATGCAGCAGGGGTGGTGGTTCCGGCCTGCCGGCAAGCCTGCGCGACAACAGTAAAGCAATGACGAGCGGCTTCCCGGCGTAGAGAACTTATCCGGCAA TACAGGGGGAAGGTGGCTTATTGATGGCACTGCTGTCATCTAGTACCCTGCGCGACTATTTCGCAGTGATGCGCTCGGCTTTAAGTGATGGACACGCCCC
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| DNA Sequence for Gene |
>Q380_RS0127755
ATGCCCCTTCCTACCCGCTTCCTGGCCGCAGGCCTGGTACTCTTGCCTTTGCTCGCCGGTGCCGCACCGTTCCAGACACCCGGCGACCGTGACCTGATCC GCGATCGCCAGGAGAACTTGCTGCAGGAGCAGCGCAAGCGTCTCGAGGAGCTTCAGCAACTGCCGGGAAGGCAGGCACCGCAGGCGCCCGCCCAGCCCCC CGAGCAAGGGCGCTGCTTCCAGATCCAGCGCATCGACTTGCAAGGTGCCAGCCTGCTCGACGAGCCACAGCGCAAGGCGCTGCTCGAAGGCTACGAAGGC AAGTGCCTGCAAGTCGGCCAGCTCAATGACCTGCTCAAGCGCATCACCGACCATTACCTGAACCGTGGCTACCTGACCACCCGTGCCTACCTGCCCCAGC AGGACCTGGGCTCCGGCGTGCTGCAGATCATCATCGTCGAAGGCCGCCTGGAAGGGCTGGACGGCTCCGCCCTGGCCAGCCCTCGGGAAATGGCCATGGC CTTCCCCGGCAATACCGGCGAGGTGCTCAACCTGCGCGAAATGGAACAGATGGTCGACCAGCTCGGCCGCCTGCCCTCGCGCCAGGTCGAGGTGGAGTTG GTGCCGGGGCAGGAGGTCGGCGGCAGCCGCGTCCAGCTCAAGGGCCAGCGTGACAAGCCCTGGCGCGTCTCTGCCAGCCGGCACAACAACGGTGACGCCA GCAGTGGCGAACAGCAGATGAACCTCGGCCTGGAGTGGGACAGCCCGCTGGGCCTGGCCGATCAACTGAGCCTGCGTGGCGGGCGCGACGTGGTCAGCGA CCACTGGCGCCATTCCGACAGCCACGGCCTGAACTACAGCCTGCCGTGGGGCTGGTGGACCTTCAACTACAGCTACAACCACAACTACTACCGCACCCGC GACACCTCCAGCGGTTTCCCCTTCAAGCTCGACGGCGACAACAGCGTGCACCAGTTCCAGGCCGAACGGGTGATCCACCGCGACAGCCTGAGCAAGACCG CGGTCAATGCCGGCGTCAGCCACCTGCGTGCGCGCAACTACCTGGACGACACCCTGATCGACGTCTCCAGCACCCGTATCACCGAACGCCAGCTGGGCGT CAACCACGGCCGGCGCATCGGCAACGCCTTCGTCAACCTCGATGCCGGCTGGCAGCAGGGCATCGGCGCGCTCGACGCCCAGGGCGCGGGCGATCCGCGC GGCAACGAACCGGTGGCGCGCTACAACAAGTACACCCTCACCCTGAGTTACCTGCAGCCGTTCCAGCTGTGGGGCGAGCAGTTCAGCTTCGACAGCCTGG CCACCGGCCAGCGCAGCGAAGACGCCCTCTACAGTGGCCAGCGCATCAGCGTCGGCGGGCTGACCTCGGTGCGTGGCTTCAAGGAACAGACCCTCACCGG CGACAGTGGCGGCTACTGGCGCAACCAGCTGCGCTGGCGCCGCCCGGTCACCTGGGCGCCGCTGCAGCCGTGGCTGCGCGAATACGGCATGGCCTTCGCC TATGACGCCGGGGTGATCAAGGGCCAGCACGGCAATGGCCAGGACCATGGTCGCCTGAGCGGCAACGCCTTCGAGTTCAACGTGCGCGGCCAGTACTTCG CCGCCAGCGCGACCTTCGCCCGCTCGCTGGAGCGCCCCGACGTCATCACCCGCCGCGAACACCCGATCTATTTCCGAGTCGACGCGTTCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCCCGACCCACCCTTTGCCCGTGACACCGCCGCCCGCGCCTGGAGTTTGTTCGACATGGATATCCGCACCCCACTGAACCAATGCATCGCCCTGATCGT CGCGGGGGTGCTGTTCCTCAACCCCATCGTCGCCACGGCCGCGCAACTGACCGTCGATGCGGCGGCCAATGCCAACACCAGCATCAAGCAGGCCGGCAAC GGGGTGCCGATCGTCAATATCGCCACGCCCAATGGCAGCGGCCTGTCGACCAACACCTTCCGCGACTACAACGTCGGCAGCAACGGGCTGATCCTCAACA ACGCCACCAGCAAGACCCAGTCGACCCAGCTGGGCGGCATCATCATCGGCAACCCCAACCTCAGGGGCCAGGCGGCCCAGGTGATCCTCAACCAGGTCAC CGGTGGCAACCGCAGTACCCTGCAGGGCTACACCGAGGTGGCGGGGCAGGCGGCCCGGGTCATCGTCGCCAACCCCCATGGCATCACCTGCAAGGGCTGC
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| Amino Acid Sequence |
>ShlB family hemolysin secretion/activation protein
MPLPTRFLAAGLVLLPLLAGAAPFQTPGDRDLIRDRQENLLQEQRKRLEELQQLPGRQAPQAPAQPPEQGRCFQIQRIDLQGASLLDEPQRKALLEGYEG KCLQVGQLNDLLKRITDHYLNRGYLTTRAYLPQQDLGSGVLQIIIVEGRLEGLDGSALASPREMAMAFPGNTGEVLNLREMEQMVDQLGRLPSRQVEVEL VPGQEVGGSRVQLKGQRDKPWRVSASRHNNGDASSGEQQMNLGLEWDSPLGLADQLSLRGGRDVVSDHWRHSDSHGLNYSLPWGWWTFNYSYNHNYYRTR DTSSGFPFKLDGDNSVHQFQAERVIHRDSLSKTAVNAGVSHLRARNYLDDTLIDVSSTRITERQLGVNHGRRIGNAFVNLDAGWQQGIGALDAQGAGDPR GNEPVARYNKYTLTLSYLQPFQLWGEQFSFDSLATGQRSEDALYSGQRISVGGLTSVRGFKEQTLTGDSGGYWRNQLRWRRPVTWAPLQPWLREYGMAFA YDAGVIKGQHGNGQDHGRLSGNAFEFNVRGQYFAASATFARSLERPDVITRREHPIYFRVDAFF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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