Strain | Pseudomonas mosselii DSM 17497 Q380DRAFT_scaffold00022.22_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGACCATCGCCTGCCGATCGCCGGCACGCGCGCCGGCGTCCCCGCCGCTTCATCGAAACACGCCAGGCGCTCGACATTGGAAACAATCCCCGTGCAGTCT CGCACGGGGGCTGCAAAGGTCGGTTCCAGCAGCGCGAACCATGCCAGACCAAGCACGCAACTATATGGATTGCACACCAGAATTAGACCTCACGGCTCGA TGTAACTTCTTATTAAAAACATGCGAAGCAATAGAAAAAAGCCAATTGGCCATCGCTAAACAACAGACTTGACGCAAGCCTAGAACAACCTAACCATCAC AAACAATCAAATATTTTTTTACATTTTTAGGCTCGACTTTGATTACTTCATTTCAGCATCGTCTAAAGGCAATTTACAGCACCGAAACATTAACGCGTAT ATAAAAAAATAAATATGTAGGACCCCTCCTACAAAATTCTAAAAAACTTCCCACAAGCACAACACCCCACAAACTTCAGCATCAGGAATAAACTTACATC
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DNA Sequence for Gene |
>Q380_RS0118880
ATGTCCAGAAACTCAAGTTCCGTCGCGCCCAAAGAGCGCATCAACATCAAATATGTTCCCGCCACGGGGGATCAACAGGCCGAGGTTGAACTGCCCCACA AGATGCTGGTGCTGGGTGACTTCGGCCTGGTCGACAACCGCAACCTGGAGGACCGCCAGCCCATGCGCATCGACAAGCACAGCTTCGACAGCGTGCTCAA GGATGCCGACGTCAAGCTGAGCCTCTCGGTCCCTTCGGCACTCAACCCTGTCGCCGACGCCGAGCTGGCGGTCGAGCTGCGGTTCAGGACGATCAACGAC TTCGGCCCCGACCAGATTGCCCGCCAGGTGCCGGAGCTGAACAAGCTGCTGGCGCTGCGCGAGGCCCTGGTCGCCCTGAAAGGCCCGCTGGGCAATGTCC CGGCATTTCGCCGGCACCTGCAGCACCTGCTGACGGACCAGCAGGCACGCAAGCAACTCGCGCAGGAGCTGGACCTGGTACTCGAAGCCCCGCCAGCGGA ATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAACGCACTTCTGACAGATGGCATATGACATAGACAACGGAGCGTCTCGGATGTCCACCACCAACAACACGACAACCACTGCCGATACCACGACTGAAAC CATCGGCAACTCGACACTGCTCGACCAGATCATGGTCGAAACCATGCTGGTACCCAGCCAGGAGGGATACCAGATCGCCAGGCAAGGCGTGGCGGCCTTT ATATCGGAGATGCTGAAAACCGATGACCCGGACCAACTGGTCAACAAACATCGGGTCGACCAGATGATTGCCGAGGTCGACCGACTTCTCGGCAAACAAA TGGATGCCATTCTTCATCAGCCCGAATTCCAGGCGCTGGAGTCCGCGTGGCGCGGATTGAAACTTCTGGTCGACCGTACCGACTTTCGCGAGAACATCAA GCTGGAAGTCCTGCATGTCAGCAAGAGCGACTTGCTCGATGACTTCGACAATGCCGCGGACATCACTTGCAGCGGGCTTTACAAACATGTCTACACCGCT
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Amino Acid Sequence |
>hypothetical protein
MSRNSSSVAPKERINIKYVPATGDQQAEVELPHKMLVLGDFGLVDNRNLEDRQPMRIDKHSFDSVLKDADVKLSLSVPSALNPVADAELAVELRFRTIND FGPDQIARQVPELNKLLALREALVALKGPLGNVPAFRRHLQHLLTDQQARKQLAQELDLVLEAPPAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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