Pseudomonas mosselii DSM 17497, Q380_RS0117700
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mosselii DSM 17497 Q380DRAFT_scaffold00019.19_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGGTGTAGCCGATGACCATCTGCTGGCCGTTGCGCTCGGCGGCGGCCTGGGCGTTCTGCTGCACCGGGAACAGCTCGGGCTCCTGGCTCCAGTACCAGC CCAGGCCGATGCACACCAGCAGGTAGAGGCCGATCAGGGTCCCCAGGGCACGGCTCCAGAGGCCGCCAAGGTAGCTACGGGTGGCAGCGCCGCGGGTTTC GACCCGCTCACGGGGCTCGGCCTTGGCCTCGCGGTTTTTCCAATCCAGCATGGCATTGTCCTTAATCAGTCACGAACGGTTCAGGGCTTGGACCACAGGC CTCGGCCAGGGTGCCACGACAAGCCCGCATGCCAGCACTATAAAGCAGACGCCGCCATTCGTATAAGCGACCATCGGGTCGGCAACTGAATGACGGTCCT TGAGCACTTTGTTGACCCCAGGCACTCGCTTGTCGGAAAAGGGGTGCTAGCATAGAGCCATCATTGAACCTGCGCCCTCCCACTCATAAGTAGTCAGGAC
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| DNA Sequence for Gene |
>Q380_RS0117700
ATGACCCAGCCAGCCGAGCCGAGCCACGAACGCCTCAAGCAGCATTTTGCCCAGCGGGTGATCCACCAGGCCCGGCAGATCCTCGAGATCTGGCAGCGCC TGCAGCGTGGCGAGTGGTCCAGCGGCGACCTGGGCGAGCTGTGCGAGGCCAACCTGCGTCTGCAGCGCTACGCCGAACGCTTCGAGCAGCCTGAGCACGG CAGCCTGTCGACGGCCATCGGCCAGACCCTGCGCGCCATCGAGGCCAACAGCGCGCGGCTCAACTCCGAACTGATCAGCGAACTCAACCGCCTGATGCAG CGCCTGTCGCGCACCGGCCTGCGCAAGGGCGACCAGCTCGACAACGTGCCCCTGCCGCCACTGCGCAAGCCGGTGTACATCGTCCTGCAGGACCATGAAC GCGCCGAGCGCCTGGCCCAGCAGCTGGAGTTCTTCGGCCTGAGCGTGCAGGCGCTGTGCAGCGCCGAGGCGTTCCAGGCGTCGATGAGCGAGCGCCTGCC CTCGGCCATCGTCATGGATGTGGACTTCACTGGCGCCGGCGTCGGCCTGCAGCTGGCGGCCCAAGCCCAGCAGGGGCTGGAGCAGCCGGTGCCGCTGCTG TTCTTCTGCTTGCACGAGACCGACACCCCGACCCGCCTGGCCGCAGTGCGCGCCGGCGGCCAGGAGTTCCTCACCGGCACCCTGGACGCCTCCAGCCTGC TGGAGAAGCTCGAGCTGTTGACCAGTGCCACTCAGTACGACCCGTTCCGCGTGCTGGTGATCGACGACTCCCGCGCCCAGGCCCTGCATACCGAGCGCCT GCTCAACAGCGCCGGGATCATCACCCGCACCCTGACCGAGCCGATCCGCACCATGAGCGAGCTGGCCGACTTCCAGCCCGACCTGATCATCCTCGATATG TACATGCCCGAGTGCACCGGCCCTGAGCTGGCCAAGGTGATCCGCCACAATGACCGCTACGTCAGCGTGCCGATCATCTACCTGTCGGCCGAGGACGACC TGGACAAGCAGCTCGACGCCATGAGCGAAGGCGGCGACGACTTCCTCACCAAGCCGATCCGCTCGCGGCACCTGGTGACCACCGTGCGCAACCGTGCCGC CCGTGCTCGCCACCTCAAGGCGCGGATGGTCCGCGACAGCCTCACCGGGCTGTACAACCACACCCATATCCTGCAGCTGCTCGAGGACTGCAGCTTCCGC GCCCGCCGCGAAGCGCAGCCGCTGAGTTTCGCCATGCTCGATATCGACCACTTCAAGAAAATCAACGACCGCCACGGCCACCCCATGGGCGACCGGGTGA TCAAGAGCCTGGCGCTGTTCCTCAAGCAGCGCCTGCGCAAGACCGACTTCATCGGCCGCTACGGCGGCGAGGAGTTCGCCATCGTCATGCCCAATACCGG ACTGGACGCGGCGCACAAGGTGCTCGACGAAATCCGTCGACGTTTTGCCGAGATCCATTACCCGGCCCAGCCCCACGACCTGCAGTGCACCTTCAGCGCC GGGGTGGTGCAGCTGGACGAGCAGCTCGACGCGCTGACCATGGCCAGCGCCGCGGACGAAGCGCTGTACCGCGCCAAGCATGCCGGACGCAACTGCGTGG TGCGGGTCGAGCCTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCCTGTGGTAGCCGGCTTGCCGGACAGAGGCCGGCGCAGGAAAACCACAGCAGAAGCCAATACCGGCACTGTGCCACTTTTTTATGGCGCCAGCCCTC CGTCGTCATCACCCCGTCACAAAATCGCAATAACTTCAGGGCCGACTTCTCCACTCCCCTCCGCAGGAAGTTCGCGGCTATGCGCCTGAAGTGGCTGACC AATTTCAACACCCTGTTGCTGGTGACCGTGTGTATTGCCCTGGGCGCGACCCTGTGGTGGTCGCAACGCGCCCTGGAACGTCCCTATCAACTGATGGAGC GCTACCTGGGCCTGTCACAGCAGTTCCAGAACGATGCCGCGCGCAACATCCAGGCCTACCTGGGCAGCGGCGACGCCCTGCGCCACGCGGCGGCCATGGA GGCCAACACTCAGTTGCAGGCGGCCCTGGCCGACTGGCCAGAGCCTTTGTCGGCCAAGCTGCGCCCGAGCCTGGACAGCCTGCAGGGCTTCACCGCCAAC
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| Amino Acid Sequence |
>diguanylate cyclase
MTQPAEPSHERLKQHFAQRVIHQARQILEIWQRLQRGEWSSGDLGELCEANLRLQRYAERFEQPEHGSLSTAIGQTLRAIEANSARLNSELISELNRLMQ RLSRTGLRKGDQLDNVPLPPLRKPVYIVLQDHERAERLAQQLEFFGLSVQALCSAEAFQASMSERLPSAIVMDVDFTGAGVGLQLAAQAQQGLEQPVPLL FFCLHETDTPTRLAAVRAGGQEFLTGTLDASSLLEKLELLTSATQYDPFRVLVIDDSRAQALHTERLLNSAGIITRTLTEPIRTMSELADFQPDLIILDM YMPECTGPELAKVIRHNDRYVSVPIIYLSAEDDLDKQLDAMSEGGDDFLTKPIRSRHLVTTVRNRAARARHLKARMVRDSLTGLYNHTHILQLLEDCSFR ARREAQPLSFAMLDIDHFKKINDRHGHPMGDRVIKSLALFLKQRLRKTDFIGRYGGEEFAIVMPNTGLDAAHKVLDEIRRRFAEIHYPAQPHDLQCTFSA GVVQLDEQLDALTMASAADEALYRAKHAGRNCVVRVEP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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