Pseudomonas mosselii DSM 17497, Q380_RS0112780
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mosselii DSM 17497 Q380DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAATAAGGAAGCGCCGTGCGTCTGCGTCTGATCGCGGTCGGCTCGCGCATGCCCAAGTGGGTCGAGGAAGGCTGGCATGAGTATGCCAAGCGCCTGCCCC CGGAGCTTGCGCTGGAGCTGGTGGAAATCCCGCTGAACACCCGCGGCAAGAATGCCGATGTCGCCCGCCTGATCCGTCAGGAGGGCGAGGCGATGCTGAG CAAGGTGCAGCCTGGGGAGCGCATCGTCACCCTCGAGGTCCATGGCAAGCCCTGGAGCACCGAGCAACTGGCGGGCGAGCTGGACCGTTGGCGCCTGGAT GCGCGCACGGTCAACCTGATGGTGGGCGGCCCGGAGGGGCTGGCGCCGGAGGTGTGCGCGCGCAGCGAACAGCGCTGGTCGCTGTCGCCGCTGACGTTGC CGCACCCATTGGTAAGGATACTCATCGGCGAGCAGATCTACCGCGCCTGGACCGTGTTGTCCGGGCATCCCTACCACAAATGAACCTGTAAGCCTGTCCG
|
|
| DNA Sequence for Gene |
>Q380_RS0112780
ATGCCGCAGCAGATTCGCCTCAAGGACCACGAGAAAGACGCCCGCCTGGTGCGCAACCGCGTTGTCGTGGGCGCCGTGGCGGTGGTGCTGCTCGTCTGCG TGCTGATCGCCCGGCTGTATTACCTGCAGGTCATCCAGTACGACTATCACTCGACGCTGTCGGAGAACAACCGGGTGCATGTGCAGCCGATTCCGCCGAC CCGAGGGCTGATTTTCGACCGTAACGGTGTGGTGGTGGCGGACAACCGCCCCAGCTTCAGCCTGGTGATGACCCGCGAGCGCGCCGGCAATGCCGGCAAA TGGCAAGACGTGCTGGATGTGATCGTCGAAGTGCTCGAACTCACCCCCGACGACCGTGCCCTGTTCGAGAAGCGCATGAAACAGGGGCGTCGGCCATTCG AGCCGGTGCCGATCCTGTTCGAGTTGAACGAGGAGCAGATTGCCCGCATCGCGGTCAACCAGTTCCGCTTGCCCGGCGTGGAAGTGGCGGCGCAACTGGT TCGCCATTATCCCCAGGGTGCGCATTTCGCCCATTCGGTGGGCTATGTCGGACGGATCAACGAGAAGGAACTCAAGACCCTTGACCCGGTGAACTACAGC GGCACCCACCACATCGGCAAGACCGGCATCGAACGCTTCTACGAAGACGAGTTGCATGGCCAGGTGGGCTACGAGGAAGTCGAGACCAACGCCCGTGGCC GCGTGCTGCGAGTGCTCAAGCGCACCGACCCGAAGCCTGGCAAGGACATCGTGCTGAGTCTGGACATCAAGCTGCAGGAGGCTGCCGAGCAGGCTCTGGG CGGGCGCCGTGGCGCCATCGTCGCCCTCGATCCGCGCACCGGCGAAGTGCTGGCCATGGTCAGCCAGCCGAGCTTCGACCCCAACCTGTTCGTCACCGGC ATCGGCTTCAAGGCTTACGCCGAACTACGCGATTCGATCGACCGGCCACTGTTCAACCGCGTGCTGCGCGGCCTCTACCCGCCAGGCTCGACCATCAAGC CGGCGGTGGCGATCGCCGGTCTGGACAGCGGCGTGGTGACGGCGGGCAGCCGGGTGTTCGACCCGGGCTACTACCAACTGCCCAACTACGATCACAAATA CCGCAACTGGAACCGCACCGGCGATGGCTGGGTCGATCTGGATGTGGCGATCATGCGATCAAACGACACGTACTTCTACGATCTTGCACACAAGATGGGG ATCGATCGGTTGTCCAGCTACATGAACAAGTTCGGTATCGGGCAGAAGGTCGCCCTGGACATGTTCGAGGAGTCGCCCGGGTTGATGCCTTCCCGTGAAT GGAAGCGCGCCACCCGCCGCCAAGCCTGGTTCCCCGGCGAAACCCTGATCCTCGGCATCGGCCAGGGCTATATGCAGACCACGCCGCTGCAGTTGGCCCA GGCCACCGCGCTGATTGCCAACAAAGGCGTGTGGAACCGTCCACACCTGGCCAAGACCATCGAAGGCCAGCCCCCAGTGGACGAGAACCCCATGGAAAAC ATCGTCCTGCGCGACAAGTCGGACTGGGCCAGGGTCACTCACGGCATGGAGCAGGTGATGCACGGCGCCCGCGGCACCGCTCGCAAGGCCGCCATTGGTT CGCAGTACCGCATCGCCGGCAAGAGCGGTACCGCTCAGGTGGTGGCGATCAAGCAGGGGGAGAAGTACGACCGCAACAAACTCCAGGAACGCCACCGCGA CCATGCGCTGTTCGTCGCCTTTGCCCCGGCCGACGATCCGCGGATCGTGGTCTCGGTGATGGTCGAGAACGGCGAGTCCGGCTCCGGCGTCGCCGCCCCC GTGGTGCGCCAGGTCATGGATGCCTGGCTGCTTGACGAGAACGGCCGGCTCAAGCCCGAGTTCGCCCCTGCCACAGTCGCCCAGGAATCGGCCCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGAACAACTTCGACCGCATGCTCTCCAGCGAGGACGTGATGCGCAGGCGCGCCAGCTTCCTGCAGCGCATTCATATCGACGGCCCCTTGCTGCTCATCCT GCTGACGCTCGCCGCTGGCAGCCTGTTCGTGCTGTATTCGGCCAGCGGCAAGAACTGGGACCTGTTGATGAAGCAGGCCAGCTCGTTCGGCATCGGCCTG GTGTCGATGTTCATCATCGCCCAGCTCGAGCCGCGCTTCATGGCGCGCTGGGTGCCGCTGGCCTACCTGGCCGGGGTGTTCCTGCTGGTCGTGGTGGACG TCATGGGCCACAACGCCATGGGCGCGACGCGCTGGATCAACATTCCCGGGGTGATCCGCTTCCAGCCCTCGGAATTCATGAAGATCATCATGCCGGCGAC CATCGCCTGGTACCTGTCCAAGCGCACCTTGCCGCCTCACCTCAAGCATGTGGCGATCAGCCTGGTCCTGATTGGCGTGCCGTTCATCCTCATCGTGCGC
|
|
| Amino Acid Sequence |
>penicillin-binding protein 2
MPQQIRLKDHEKDARLVRNRVVVGAVAVVLLVCVLIARLYYLQVIQYDYHSTLSENNRVHVQPIPPTRGLIFDRNGVVVADNRPSFSLVMTRERAGNAGK WQDVLDVIVEVLELTPDDRALFEKRMKQGRRPFEPVPILFELNEEQIARIAVNQFRLPGVEVAAQLVRHYPQGAHFAHSVGYVGRINEKELKTLDPVNYS GTHHIGKTGIERFYEDELHGQVGYEEVETNARGRVLRVLKRTDPKPGKDIVLSLDIKLQEAAEQALGGRRGAIVALDPRTGEVLAMVSQPSFDPNLFVTG IGFKAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTAGSRVFDPGYYQLPNYDHKYRNWNRTGDGWVDLDVAIMRSNDTYFYDLAHKMG IDRLSSYMNKFGIGQKVALDMFEESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQTTPLQLAQATALIANKGVWNRPHLAKTIEGQPPVDENPMEN IVLRDKSDWARVTHGMEQVMHGARGTARKAAIGSQYRIAGKSGTAQVVAIKQGEKYDRNKLQERHRDHALFVAFAPADDPRIVVSVMVENGESGSGVAAP VVRQVMDAWLLDENGRLKPEFAPATVAQESAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|