Pseudomonas mosselii DSM 17497, Q380_RS0111155
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mosselii DSM 17497 Q380DRAFT_scaffold00010.10_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGGGTCGCTTTTGAAGCAGCGGATGTCGACGCGCTCGGCCAGGCCCTGCCATTGGTAGTGCGCCACCAGTTCGGTAAGGATCTGCTCGAGGGTCTTGC CGTGCAGCGCGTTGTGATTGGCCGTGCTCATGCCAGTGCTCCAGGTTCGGGAAGGTGCGCACCTTACACGAGTGTAGTGGCATCTACAGCCTCTACCGCT GAGCCCTGTAGGAGACTGCCCAGCCCTTCGGGCCACGCTGTCGCGCTGGAAACTGTCCTCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGCAGCGG CCCCAGGTTCTGAGCCACCATCAAAAATTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTGGACGATCGCCTACAGGGT AAACACGTTACTTCACAAAGTACTGGCCCGTGGCAAACAGCTTGTGATGAAATGTTATAAAGTAACTATTAACAATTCTGCCAAGGAACGCCACATCCCC
|
|
| DNA Sequence for Gene |
>Q380_RS0111155
ATGCGTCACATGCCGCTGCACCTCTCTCCCCTTGCCGTCGCGCTCTGGCTGGTCTCCACCTCCAGCCAGGCCGTGGAACTGCAACCCCAGGTGATCACTG CCAACCCGCTGGGCAACGCCCAACTGGCCGCGCCCAGCACCGTCCTCGAAGGCGACGACCTGCTGCAACAGCAACACGCCAGCCTCGGTGAAACCCTCAA CAAACAGCCCGGCGTCGCCTCCACCTGGTTCGGCCCCGGTGCCAGCCGCCCGGTAATCCGCGGCCTGGACGGCGACCGTATTCGTATCCTGCGCAACGGC GTCGGCGCCCTGGACGCCTCGTCGCTGTCCTACGACCACGCCGTGCCACTGGACCCGGTCACCGTCGAGCGGGTCGAGATCGTCCGCGGCCCGGCCGCCC TGCTATATGGCGGCAACGCCATCGGTGGCGTGGTCAACACCTTCGACAACCGCATCCCCGACTCGCCCATCGACGGCATCCATGGCGCGGGCGAACTGCG CTACGGCGGCGCCGACACCACCCGCAGCAGCGCTGGCAAGCTGGAGGCCGGCAACGGCGCCTTCGCCCTGCACCTGGACGCCAACAGCCGCCAGTTCAAC GACCTGCGCATCCCCGGCTACGCCCGCAGTTCGAAGGTCCGCGATGCCGACGAGCCCGGCGGCAAGCACCGCCTGGAGAACAGCGACGGTCGCCAGGACG GCGGTGCGATCGGCGGTTCGTACCATTGGGATCACGGCTACACCGGCCTGTCCTACAGCCGCTACGACAGCAACTACGGCTCGGTGGCCGAGCCCGGCGT GCGCCTGGACATGCAGCAGGACCACTACGGCTTCGCCTCGGAACTGCGCGACCTCGACGGGCCGTTCAGCTCGGTCAAGGTCGATGCCGGCTACACCGAC TACCAGCACCGCGAAATCGAAAGCGGCGAGGTGCACACCACCTTCAAGAACAAAGGCTACGAAGCGCGCATCGAGGCCCGTCACCAGCCGCTGGGCCCGG TCGAGGGCGTGGTCGGCGCCCAGGTCAGCCGCAACGAATTCTCCGCGCTAGGCGAGGAAGCCTTTGTCCCGCACACCGATACCGACAGCCTGGCGCTGTT CCTGCTTGAGCAATGGCAGGCCAGCGAACGCCTGAACCTGAGCCTGGGCGCGCGCCTGGAACACACCCGGGTCGATCCGGATGCCAAGGGCAACGAGAAC TTCGCCGGGGCCGACAGCGCCAGCAGCTTCAACGCCTTGAGCCTGTCCTCGGGCGCGGTGTACCAGCTCGACCCGATCTGGTCGCTGGCCGCCAACCTTG GCTACACCGAGCGCGCGCCGACTTTCTACGAGCTGTACGCCAACGGTGCCCACGTGGCCACCGGCGCCTACGAGATCGGCGATCCGAACCTGAACAAGGA GGAGGCCATCTCCACCGACCTGGCCCTGCGCTTCGACAACGGCACCCACAAGGGCAGCGTCGGCGTGTTCTACAGCCATTTTCGCAACTACATCGGCCTG ATTGGCACCGGCAACCTGCGTGAAGGCCATCATCACGACCACGACGATCATGACCATGACCATGACCACGATCATGATCATGACCACGGCGATATCCCCG AGTATGCCTATCAGGGCGTGCGGGCACGTTTCTACGGCATCGAGGCCCAGGACCGCTGGCAACTGCTGAAAAACCACTACGGCAGCTTCGCCCTGGAACT GTCCGGCGACTACACCCGGGCCAAGAACCTCGACAGCGGCGAGCCGCTGCCGCGCATCGCCCCGCTGCGCCTGAACAGCGGCCTGGTCTGGGAGCTGGAC CGCTGGCAGGCGCGTGTCGATGTGCAGCACGCGGCGTCACAGCATCGCAAACCGGCCAACGAGACCAGCACCGATGGCTACACCACCCTCGGCGCCAGCC TGGGGTATCGCTTCGACATCGGCCAGAGTGAATGGCTGGCCTTCGTGCGCGGCGAGAACCTCACCGACCAGACCGTGCGCTATGCCAGCTCGATCCTGCG TGATATCGCGCCGGCGCCGGGGCGTAGTGTGCAGGTGGGGCTGCGTACCAGCTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTGCCAGGGGCGCTATGCGCCCCTTTCGCCGGCAAGCCGGCTCCCACAGGACTGCGCTGTACCGGTGGGAGCCGACTTGCCGGCGAATAGGCTACAAAGC AGCCTCCTGCGCACTTACTGTTACCCCGTCAGCAACAATCCCCTGCGACATTTTGTCTTTTTTTCTTACAACTTCCCCTATATCCTCCCCGCCGCAAGCT GAATCGCTTCATTCGATACCCAACGCAGTCATTTCCCTTCGAAGATCTCGCACTTCGTTGCGCTTGCCGTTTCTTCAACAATCAAAAGATAGCGCTATCT CATGCTCCAGCTGCCCAATACCCGCTACTCCGGCCTCGCCCTCGCCACCCTGCTCGGCGCCCTGTCCCCCACCACCAGCGCCAGCGAAATGTTCGCCAAG GACTCGCCGTGGATGCTCGGAGACTGGGGCGGAACCCGCAGCGAGCTGCTGGAGAAAGGCTATGACTTCACCCTCGGCTACACCGGCGAGATGGGCAGCA
|
|
| Amino Acid Sequence |
>TonB-dependent receptor
MRHMPLHLSPLAVALWLVSTSSQAVELQPQVITANPLGNAQLAAPSTVLEGDDLLQQQHASLGETLNKQPGVASTWFGPGASRPVIRGLDGDRIRILRNG VGALDASSLSYDHAVPLDPVTVERVEIVRGPAALLYGGNAIGGVVNTFDNRIPDSPIDGIHGAGELRYGGADTTRSSAGKLEAGNGAFALHLDANSRQFN DLRIPGYARSSKVRDADEPGGKHRLENSDGRQDGGAIGGSYHWDHGYTGLSYSRYDSNYGSVAEPGVRLDMQQDHYGFASELRDLDGPFSSVKVDAGYTD YQHREIESGEVHTTFKNKGYEARIEARHQPLGPVEGVVGAQVSRNEFSALGEEAFVPHTDTDSLALFLLEQWQASERLNLSLGARLEHTRVDPDAKGNEN FAGADSASSFNALSLSSGAVYQLDPIWSLAANLGYTERAPTFYELYANGAHVATGAYEIGDPNLNKEEAISTDLALRFDNGTHKGSVGVFYSHFRNYIGL IGTGNLREGHHHDHDDHDHDHDHDHDHDHGDIPEYAYQGVRARFYGIEAQDRWQLLKNHYGSFALELSGDYTRAKNLDSGEPLPRIAPLRLNSGLVWELD RWQARVDVQHAASQHRKPANETSTDGYTTLGASLGYRFDIGQSEWLAFVRGENLTDQTVRYASSILRDIAPAPGRSVQVGLRTSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|