Pseudomonas mosselii DSM 17497, Q380_RS0107730 (hscA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mosselii DSM 17497 Q380DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTGGCCGTTCGCTACCGCGAGCTGGCCCGCGAGGTCCATCCGGACCGTTTCGCCGACGCTTCCGAGCGCGAGCAGCGCGTAGCGCTGGAAAAGTCGGCG GCCCTCAACGACGCCTACCAGACCTTGCGCAGCGCGCCGCGCCGGGCCCGCTACCTGCTGGCCATCGGCGGCCATGAGGTGCCTCAGGAAGTCACGGTGC ACGACCCGGACTTCCTGCTGCAGCAGATGCAGTGGCGCGAAGAACTCGAAGACCTGCAGGACGAAGCCGATCTCGACGGTGTCGCCGTGTTCAAGAAGCG CCTCAGGGTCGCCCAGGACACGCTGAACGAGGATTTCGCCGCCTGCTGGGATATTGCTGCAGAGCGTGAGCAGGCCGAGCGCCTGATGCGCCGCATGCAG TTCCTCGACAAGCTCGCCCAAGAAGTGCGCCAACTCGAAGAGCGCCTCGACGATTAACCCCGGCGTTGCCCGTGATGACGCCTAAGGTACTCAGATAAGC
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| DNA Sequence for Gene |
>Q380_RS0107730
|hscA
ATGGCCCTACTGCAGATCGCCGAACCCGGTCAGAGCCCCCAGCCGCACCAGCGCCGCCTGGCGGTGGGCATCGACCTGGGCACCACCAATTCTCTCGTCG CCGCCGTGCGCAGCGGGCGCAGCGAACCGCTGCCCGATGCCCAGGGCAGTGTCATCCTGCCATCCGCCGTGCGTTATCTCGACAACGCTGTCGAAGTCGG CCTGGCCGCGCGCGAAGCTGCCCCCAGCGACCCGCTCAACAGCATCCTGTCGGTCAAGCGTCTGATGGGGCGTGGCCTGGCGGACGTCAAGCAGTTGGGC GAGCAACTGCCGTACCGTTTTGTCGGCGGTGAGTCGCACATGCCGTTCATCGACACCGTCCAGGGTCCGAAAAGCCCGGTGGAAGTGTCGGCCGATATTC TCAAGGTGCTGCGTCAGCGTGCCGAGGAAACCCTCGGTGGCGAGCTGGTCGGCGCGGTGATCACCGTCCCGGCCTATTTCGACGATGCCCAGCGCCAGGC GACCAAGGACGCCGCCAAGCTGGCCGGCCTCAATGTCCTGCGCTTGCTCAACGAACCGACCGCGGCTGCCGTGGCCTATGGCCTGGATCAGGATGCCGAA GGCGTCGTGGCGATTTTCGACCTGGGCGGCGGTACCTTCGATATCTCCATCCTGCGCCTGACCGCTGGTGTCTTCGAAGTGCTGGCTACCGGTGGCGACA CTGCCCTGGGTGGCGATGACTTCGACCATGCGATCGCTGGCTGGATCATCGGGCAGGCCGGTTTGTCCGCCGACCTCGATCCGGCCACCCAGCGCCTGCT GCTGCAGACCGCTTGCGCGGCCAAGGAAGCCTTGACCGACAGTGAAGCGGTCAGCGTCCACCATGGCGCCTGGCAGGGCGAGCTGACCCGTGCCGCCTTC GAAGCCATGATCGAACCGATGATCGCCCGCAGTCTCAAGGCCTGCCGCCGCGCCGTGCGCGACAGCGGCATCGAGCTGGAAGAGGTCGGCGCGGTGGTCA TGGTCGGCGGTTCGACCCGTGTGCCGCGCGTGCGCGAGGCGGTCGGCGCGCTGTTCGGTCGTACCCCGCTGACCTCGATCGACCCGGACCAGGTGGTGGC CATCGGTGCCGCCATCCAGGCCGATACCCTCGCCGGCAACCGCCGCGAAGGCGGCGAGCTGCTGCTGCTCGACGTCATCCCGCTGTCCCTGGGGCTTGAG ACCATGGGCGGGCTGATGGAGAAGGTGATCCCGCGCAACACCACCATTCCGGTGGCCCGCGCCCAGGAATTCACCACGTACAAAGATGGCCAGTCGGCCA TGATGATCCACGTCCTGCAGGGCGAGCGCGAGCTGATCAGCGACTGCCGTTCCCTGGCGCGCTTCGAGCTGCGCGGCATCCCGGCCATGGTCGCGGGCGC GGCGAAGATCCGCGTGACCTTCCAGGTCGACGCCGACGGCCTGCTCAGCGTCGCGGCCCGCGAACTGGGTTCGGGCGTGGAATCGAGCATCCAGGTCAAG CCGTCCTACGGCCTGACCGACGGCGAGATCGCCCGCATGCTCAAGGACTCCTTCGAGCATGCAGGCTCCGACAAGCACGCCCGCCAACTGCGCGAGCACC AGGTCGACGCCGAGCGCCTGCTCGAGGCGGTGCAGGGCGCCCTGGACGCCGATGGCGAGCGCCTGCTCAGCAGTGACGAGCGCGACGCGATCGAATTCCA GATGCAGGAACTACGTGATTTGCTGACCGGCACCGATGGCGCCGCCATCGAGCAACAGACCAAGCGTCTGTCGCAGGTGACCGATGCATTTGCCGCCCGT CGCCTTGATTCGACGGTCAAAGCCGCACTGGCCGGGCGCAACCTGAATGAGATCGAGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATGCCGCTGGTGACATTCCTGCCGCACGAGAAGTTCTGCCCCGAGGGCTTGACCGTGGAAGTGCCGACCGGGACCAATATCCTGGAGTTGGCCCACG ACCATCACATCGAGATGGAAAGCGCCTGCGGCGGTGTCAAGGCCTGCACCACTTGCCACTGCATCATCCGCAAGGGCTTCGACTCGCTTGAAGAAGCCGA CGAGCTCGAAGAGGACATGCTGGACAAGGCCTGGGGCCTGGAGGCGCAGTCGCGCCTGGGTTGCCAGGTGGTTGTCGGCGATGAGGACCTCACCATCGAG ATTCCCAAGTATTCGCTCAACCACGCCGCCGAAGCGCCGCACTGAGGGCCTGTACATGAGTCTGAAATGGGTTGATGTACTTGAGATCGCCATCCAGCTT GCGGAAAGCAAGCCCGAGGTCGATCCTCATTACGTGAATTTCGTCGATCTGCGCGCCTGGGTCATGGCGCTGCCGGACTTCGATGACGATCCGTCGCGTT
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| Amino Acid Sequence |
>chaperone protein HscA
MALLQIAEPGQSPQPHQRRLAVGIDLGTTNSLVAAVRSGRSEPLPDAQGSVILPSAVRYLDNAVEVGLAAREAAPSDPLNSILSVKRLMGRGLADVKQLG EQLPYRFVGGESHMPFIDTVQGPKSPVEVSADILKVLRQRAEETLGGELVGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAVAYGLDQDAE GVVAIFDLGGGTFDISILRLTAGVFEVLATGGDTALGGDDFDHAIAGWIIGQAGLSADLDPATQRLLLQTACAAKEALTDSEAVSVHHGAWQGELTRAAF EAMIEPMIARSLKACRRAVRDSGIELEEVGAVVMVGGSTRVPRVREAVGALFGRTPLTSIDPDQVVAIGAAIQADTLAGNRREGGELLLLDVIPLSLGLE TMGGLMEKVIPRNTTIPVARAQEFTTYKDGQSAMMIHVLQGERELISDCRSLARFELRGIPAMVAGAAKIRVTFQVDADGLLSVAARELGSGVESSIQVK PSYGLTDGEIARMLKDSFEHAGSDKHARQLREHQVDAERLLEAVQGALDADGERLLSSDERDAIEFQMQELRDLLTGTDGAAIEQQTKRLSQVTDAFAAR RLDSTVKAALAGRNLNEIEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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