Pseudomonas fulva NBRC 16636 = DSM 17004, Q382_RS0118410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00037.37_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTTCAATGAAATGCCCAAGACCGACTTTGCCGACCCGTATGTGATCAAGAAGCTCAGCACCGGGGAGCCTGCGCCGGGGGTGAAGGTTGAGGTGACCCGG GCTGATGGCAGCGTGATGCAGTATGTGTCAGATGCGGCTGGGAAGATTCCGGTGCAACAGAGCCAGATTGCTGAGTTCATGAAAATTAAAGTCTTGGGGG ATGCATGACGGGTTGTTTCGCTAAGCCTCGTCTATCCACATTTTGAAATAAGGGCCATCGCC
|
|
| DNA Sequence for Gene |
>Q382_RS0118410
ATGGGAACTAAAACCACGACACCTAAAGACGCTGCGTTGCACCTGCCTCAAGAATACGATGAGGATGGCATGCTGACGGCCACCACCACACTGTCTTCGT CCACCGACCCCAGAGAAAAGTGTGTAGCCTACAAAGGTCAGAAAATTGTACCGATCATCTTCATTCCTGGGATCATGGGTACCAACCTCATGAACATGAA AACCAAGAAGCGTGTCTGGGTTGCCCCAAACATGGACGGCTTATTCCCGGTGGTCAAAACGCTTGGCCTGCTATTCGGCAGCTGGTTCAAGTCATCTAAA CAACGGCAGGCGGAGCTTGACTCCACGCCGGGTGCTTTGGGTGTTTACGAAGGAGGTGAGTTGGACGATGCCGGCAGCGGGCTTTCAACAGATGAAATGC GCACCCGCAAGTGGGGGGCAATCATGCGATCTGCTTATCATCCGATCATGGGTGAAATGCAACGGCAGATGAATAACATCATGCTCAACAACGATCTTCA GGGCGAATGGAAAGAGCGTGTTGGCCAAGCACCAGGCGACTGGGGAGACTGGGAAAACAACCCCAGTCTTGCAGCAATGGGCGATGCGAGTGGTTTGAAA AACGCAGCAGATACACAATATGAGGTGTGGGCGGCTGGCTATAATTGGCTTCAATCGAATCGAGATTCAGCGAAAGACATTATTAACTTCATCAACAACA CAGTACTTCCACATTACAATGGCAAAGCCGGAAACGTAATCATCGTCACCCATTCAATGGGTGGGTTAGTAGCACGAGCAATGGTGGCATGCCATGGATT CTGCAAGTTATATGGAATTATTCATGGCGCAATGCCTGCTACAGGAGCTCCGGCGAGTTACAAGCGAGTTCGCGCTGGCTTTGAAGCATTGGCTGAAAAG AAAATTTTAGGCCGAGATGCTGCCGATGCAGTCGCGGTGATGGCGTTCGCATCCGGGCCGTTGGAGCTGCTCCCTTCCCACGATTACAATGACGGCCACC CGTGGCTTTTCACCAAAGACACCACTACATTAGACCGCGCAATGCGACTGCCAGTGCGCTGCCCTTATGAAGAAATCTACAAATCAGATAACTGGTGGGG TTTAGTTCCTGACAATAATAACAGACTGTTAGACCCCGCCGGAGTTGTGGCGGCGCACCAGGCCAAGCAATCTAAATGGAGTGGCATTGGCGATGAACCT CCATCATTACGATCACGGTTTTTCGAAGTTATCGATGGCGTCAAGGCCTTCCATGGAGACATAGAGGAAAAGTACCACTCTGAAACATTTATACATTACG CTGCCGAATCAAAATCTTCGAAGCTTTATACTTGGGGCACTATTGAGTGGGGGGCAAAAAATTTGATAGGCCTTGATGCAATGAATGCAAAACTGAGCGG TGACAATCTGGAGGCGCAAGTGGAACTCAATGGGTTTTACACACTCGAAATTGGCCCAGGCTATTATCCTGGCGACGGAACGGTGCCTGCTTTTTCCTCT TCGTCGCCACGTGGAAAGCCGGGGGTTAAGGGTGCCTTCGCGCATGGTCAGAACAGCGGAGCGTTAAACCAATACTGCAAGACAGGAATATTCAATCAGT CAACCGGTTACGGCCATCAAGATGCCTATACTGACAAGGCTGGGCGCACTCGATTTGCCACACTGTACAGCTTAGTTCGACTATCTGCACAAATCAGCTA A
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGGTGCCCAAGGAGTAGTAAATGCGCAGTATGTATAAGGCTTCTCTAACGCTATCTGCCCTATGGTTACTCAATATATCCGTTGCGACTGCAGACAAAAT GGAAGGCAACGCCATGAATGATACAAACTGGACTACACATTATTTTGGCCGTTTCGAAATCACCCTACCGAAAGGATCAGAAATTTCGGCAGACTATAAA ATTTTCAACGAAAATCTTGTCCTGATAAGTAAAAACGGACGCAGTGACCTGCCGACCTTAGCAAACCAAAAAACAGAGGAACTCAAAAAGGGTATTGCTC GAGGAACCAGCAGTCGTTACGAAAAAACGGTGCCTTTAAACAACGGCAGCATATTGCTTCTTTCTCGGCTCGGTGAGTTTTATACATTCAATGTATATTT ACTTTCAAATAAAAATACACTCTATCACCTGATGGCCAAAACAATTAACAAAAAAAGCATACCTGGCGGCGTTGAAAAAATGCGCTTGCTGAGCGATTCA
|
|
| Amino Acid Sequence |
>hypothetical protein
MGTKTTTPKDAALHLPQEYDEDGMLTATTTLSSSTDPREKCVAYKGQKIVPIIFIPGIMGTNLMNMKTKKRVWVAPNMDGLFPVVKTLGLLFGSWFKSSK QRQAELDSTPGALGVYEGGELDDAGSGLSTDEMRTRKWGAIMRSAYHPIMGEMQRQMNNIMLNNDLQGEWKERVGQAPGDWGDWENNPSLAAMGDASGLK NAADTQYEVWAAGYNWLQSNRDSAKDIINFINNTVLPHYNGKAGNVIIVTHSMGGLVARAMVACHGFCKLYGIIHGAMPATGAPASYKRVRAGFEALAEK KILGRDAADAVAVMAFASGPLELLPSHDYNDGHPWLFTKDTTTLDRAMRLPVRCPYEEIYKSDNWWGLVPDNNNRLLDPAGVVAAHQAKQSKWSGIGDEP PSLRSRFFEVIDGVKAFHGDIEEKYHSETFIHYAAESKSSKLYTWGTIEWGAKNLIGLDAMNAKLSGDNLEAQVELNGFYTLEIGPGYYPGDGTVPAFSS SSPRGKPGVKGAFAHGQNSGALNQYCKTGIFNQSTGYGHQDAYTDKAGRTRFATLYSLVRLSAQIS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|