Strain | Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCTGGCGACAACGCAGCGTCGGTCCAACTGGTGCTCGAAGACGGCACCCTGTACAAGCAGGAAGGGCGCCTGGAGTTCTCCGAAGTGGCCGTGGACGA AACCACCGGCTCGGTCACCCTGCGTGCCATCTTCCCCAACCCTGACCACACCCTGTTGCCTGGCATGTTCGTGCATGCACGGCTCAAGGCGGGCGTGAAC GCCAATGCCATCCTGGCACCGCAGCAGGGCGTGACGCGCGACCTCAAGGGCGCCCCTACCGCGCTGGTGGTGAACAAGGACAACAAGGTCGAACTGCGCC AGCTCAAGGCCAGCCGTACCGTGGGCAGCGACTGGCTGATCGAGGAAGGCCTGAACCCAGGCGACCGCCTGATCACCGAAGGCTTGCAGTACGTGCGTCC AGGTGCCGAGGTCAAGGTCAGCGAAGCCACCAACGTCAAGAAGCCGGACAGCCCCAACCAGGGCAACGCAGCGAAAGCAGACGCCAAAGCGGAGTAAACC
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DNA Sequence for Gene |
>Q382_RS0110255
ATGTCGAAGTTCTTTATTGATCGCCCGATCTTCGCCTGGGTGATCGCCTTGGTGATCATGCTGGTCGGCGCCTTGTCGATCCTGAAGTTGCCGATCAACC AGTACCCCAGCATCGCCCCACCGGCCATCGCCATTGCCGTGACCTACCCGGGCGCTTCGGCGCAAACCGTGCAGGATACGGTGGTGCAGGTGATCGAACA GCAGCTCAACGGTATCGACAACCTGCGTTATGTGTCGTCGGAAAGTAACTCCGACGGCAGCATGACCATTACTGCCACCTTCGAGCAGGGTACCAACCCC GACACCGCCCAGGTGCAGGTGCAGAACAAGCTCAACCTGGCCACCCCCTTGCTGCCGCAGGAAGTGCAGCAACAAGGTATCCGCGTCACCAAGGCCGTGA AGAACTTCCTGATGGTGATCGGTCTGGTGTCCGAAGACGGCAGCATGACCAAGGACGACCTGGCCAACTACATCGTCTCCAACATGCAGGACCCGATCTC GCGTACGGCCGGTGTGGGTGATTTCCAGGTGTTCGGCGCCCAGTACGCCATGCGCATCTGGCTCGATCCGGCCAAATTGAACAAGTTCCAGCTGACCCCG GTGGACGTCAAGACCGCCGTGGCTGCCCAGAACGTTCAGGTCTCCTCCGGCCAGCTCGGCGGCCTGCCAGCCGTGCCTGGGACGCAGCTCAACGCCACCA TCATCGGCAAGACCCGCCTGCAGACTGCCGAGCAGTTCGAGAAGATCCTGCTCAAGGTCAACAACGACGGCTCCCAGGTACGCCTGGGCGATGTGGCCCA GGTCAGCCTTGGCGGCGAGAACTACGCCGTCAGCGCCCAGTTCAACGGCAAGCCCGCCTCGGGCCTGGCCGTCAAGCTGGCCACGGGCGCCAACGCACTG GATACGGCCAAGGCCCTGCGCCAGACCATCGCCGACCTGGAGCCGTTCTTCCCGCCAGGGGTCAAGGCGGTATTCCCGTATGACACCACGCCGGTGGTCA CCGAATCGATCAGCGGGGTCATCCATACCCTGATCGAAGCCGTCGTGCTGGTGTTCCTGGTGATGTACCTGTTCCTGCAGAACTTCCGCGCCACCATCAT CACCACCATGACCGTACCGGTGGTTTTGCTGGGCACCTTCGGCATCCTTGCCGCCGCAGGCTTCAGCATCAACACCCTGACCATGTTCGCCATGGTGCTG GCCATCGGCCTGCTGGTGGACGATGCCATCGTGGTGGTGGAAAACGTCGAGCGGGTGATGTCCGAAGAAGGGCTGCCGCCCAAGGAGGCGACCAAGCGCT CCATGGAGCAGATCCAGGGCGCGCTGGTGGGTATCGCCCTGGTATTGTCCGCCGTACTGCTGCCCATGGCGTTCTTCGGGGGCTCCACCGGTGTGATCTA CCGCCAGTTCTCCATCACCATCGTCTCGGCCATGGGCCTGTCGGTGCTGGTGGCGCTGGTCTTCACCCCGGCGCTGTGCGCCACCATGCTCAAGCCTTTG AAAAAGGGCCAGCACCATGAGGCCAAGGGTGGGTTCTTCGGCTGGTTCAACCGCAGCTTCGATCGCAGCGTCAACGGCTACGAGCGCAGCGTGGGGACCA TCCTGCGCAACAAGATTCCGTTCCTGTTGGGCTATGCCCTGATCGTGGCCGGCATGATTTTCCTGTTCACCCGCATTCCAACCGCGTTCCTGCCCGAGGA AGACCAGGGTGTACTGTTTGCCCAGGTGCAGACGCCGGCCGGCTCCAGTGCCGAGCGTACCCAGGCAGTGGTCGATCAGATGCGCGAATACCTGCTCAAG GACGAAGCCGACACGGTGTCCTCGGTGTTCACCGTCAACGGCTTCAACTTCGCAGGCCGCGGCCAGAGCTCGGGCATGGCGTTCATCATGCTCAAGCCCT GGGGTGAGCGTACGGCGGAAAACAGCGTGTTCGGTCTTGCCCAGCGGGCGCAGCAGCACTTCTTCAGCTTCCGCGACGCCATGGTCTTCGCGTTCGCACC ACCAGCGGTGCTCGAGCTGGGTAACGCCACAGGCTTCGACGTGTTCCTGCAGGACCGCGGCGGTGTCGGCCATGCCAAGCTGATGGAGGCCCGCAACCAG TTCCTGGCCAAGGCTTCGCAAAGCAAGATCCTCAGCGGTGTACGCCCCAATGGCCTGAACGACGAACCGCAGTACCAGCTGACCATCGATGACGAGCGTG CCAGCGCCCTGGGCGTGACCATCTCGGACATCAACAACACTCTGTCGATTGCCTTCGGTGCCAGCTACGTCAACGACTTCATCGACCGCGGCCGGGTCAA GAAGGTCTACATCCAGGGCGAAGCCAATGCCCGGATGAGCCCGGAAGACCTGCAGAAGTGGTATGTGCGCAACGCCGATGGCGAAATGGTGCCGTTCTCT TCGTTCGCCAAAGGTGAATGGACCTACGGCTCGCCCAAGCTCTCGCGCTACAACGGCGTAGAAGCCATGGAAATCCTCGGTGCGCCTGCCCCTGGCTACA GTACCGGTGAGGCCATGGCCGAGGTCGAGCGCATCGCCGGCGAACTGCCAAGCGGCGTAGGTTTCTCCTGGACGGGCATGTCCTACGAGGAGAAGCTGTC TGGTTCGCAAATGCCGGCCCTGTTCGCCCTGTCGCTGCTGTTCGTGTTCCTGTGCCTGGCAGCGCTGTACGAAAGCTGGTCGATTCCGATCGCCGTGGTG CTGGTGGTGCCACTGGGCATCATCGGTGCGTTGATCGCTACCAGCCTGCGCGGGCTGTCCAATGACGTGTACTTCCTGGTCGGCCTCTTGACCACCATCG GCCTGGCGGCCAAGAACGCCATTCTGATCGTCGAGTTCGCCAAGGAATTGCACGAGCAGGGCCGCAGCCTGTACGACGCGGCGATCGAGGCGTGCCGCAT GCGTTTGCGCCCGATCATCATGACCTCGCTGGCCTTCATCCTCGGCGTGGTACCGTTGACCATCGCCAGCGGCGCTGGCGCCGGCAGCCAGCACGCCATT GGTACCGGCGTGATCGGCGGCATGATCAGTGCGACCGTGCTGGCCATCTTCTGGGTACCGTTGTTCTTCGTCGCAGTGTCGTCGCTGTTCGGCAGCAAAG AGCCGAAAAAAGATGACACCCCTGAAACTCCACGTTATGAGGCTGGGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCAAGTCTTTGTTGTCCCTGGCAGTCACCGCTTTCATCCTCGGCGGCTGCTCGCTGATTCCCGACTACCAGACCCCGGAAGCACCGGTGGCTGAGCAGTG GCCGCAAGGCCCGGCCTACTCGCCCACCCAGTCGGCGGACGTCGCTGCCGCTGAACAGGGCTGGCGGCAGTTCTTCAACGACCCGGCGCTGCAGCAACTG ATCCAGACCGCGCTGGTCAACAACCGGGACCTGCGCGTCGCGGCGCTGAACATCGACGCCTACCGCGCCCAGTACCGCATCCAGCGTGCGGACCTGTTCC CGGCGGTGTCGGCCAACGGCAGTGGCAGCCGTCAACGCATCCCGGCGAACATGTCGCAGACTGGCCAGTCGGGCATCACCAGCCAGTATTCGGCAACCCT GGGCGTCAGTGCCTATGAACTCGACCTGTTCGGCCGCGTGCGCAGCCTTTCGGAACAGGCGCTGGAGACCTACCTGTCCAGCGAGCAGGCGCGTCGCTCC
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Amino Acid Sequence |
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNP DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLMVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGAQYAMRIWLDPAKLNKFQLTP VDVKTAVAAQNVQVSSGQLGGLPAVPGTQLNATIIGKTRLQTAEQFEKILLKVNNDGSQVRLGDVAQVSLGGENYAVSAQFNGKPASGLAVKLATGANAL DTAKALRQTIADLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQNFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVL AIGLLVDDAIVVVENVERVMSEEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGLSVLVALVFTPALCATMLKPL KKGQHHEAKGGFFGWFNRSFDRSVNGYERSVGTILRNKIPFLLGYALIVAGMIFLFTRIPTAFLPEEDQGVLFAQVQTPAGSSAERTQAVVDQMREYLLK DEADTVSSVFTVNGFNFAGRGQSSGMAFIMLKPWGERTAENSVFGLAQRAQQHFFSFRDAMVFAFAPPAVLELGNATGFDVFLQDRGGVGHAKLMEARNQ FLAKASQSKILSGVRPNGLNDEPQYQLTIDDERASALGVTISDINNTLSIAFGASYVNDFIDRGRVKKVYIQGEANARMSPEDLQKWYVRNADGEMVPFS SFAKGEWTYGSPKLSRYNGVEAMEILGAPAPGYSTGEAMAEVERIAGELPSGVGFSWTGMSYEEKLSGSQMPALFALSLLFVFLCLAALYESWSIPIAVV LVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGRSLYDAAIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAI GTGVIGGMISATVLAIFWVPLFFVAVSSLFGSKEPKKDDTPETPRYEAGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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