Pseudomonas fulva NBRC 16636 = DSM 17004, Q382_RS0109605
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCTGCTGCTCGGCCGCCTGTACTACGAGGGCAAGCAGCTGCCGGCCGATGCCGAGAGCGCCGAGCGTCACCTGCTGGCCGCCGCCACGGCCGGCGAGA CCAGTGCCCGCTACTACCTGGGCCAACTCTATCGCCGTGGCTACCTGGGCAACGTCGAGCCGCAGAAAGCGCTGGACAACCTGCTGGCGGCCGCACGCGG TGGCCAGGTCAGTGCCGACTATGCCCTGGCGCAGCTGTTCAGCGAGGGGCATGGCATCCGCCCGCAACCTGCCGATGCATGGGTCTTCGCGCAACTCGCC CAGGCCAACCCGACGCCCCAGTCGGCCGAGCTGTTGCAGCAGATCGAGCAGCAGCTGGCGCCCGAGGCGCGCCGCCAGGCTCAGCAGACGCTGGCGCGGG AGACCCAAGCTCGCATGGCCATGACGCCCGGCGCCATCAATACCCTGGCCCTGGATGTGCTGCAAGACGATGAAAACGACGTAGACGGTGAGGACGCGCC
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| DNA Sequence for Gene |
>Q382_RS0109605
ATGATGCTCAACCCTTTCGTCAAAGCCGGGATCGGCCTTGGCTTTGCCTTGCTGTGGTCCTGCCCGAGCCTGGCCCAGGTCACGGCCGAACGCAATTTTG GCCTGGAAGTGAAAGTCACTGGCCAGTCCGAAGACGACCGCGACCTGGGCACCCGCCCAGGCGGTGACGTCAATGGCCTGGGCCTGGACCTGCGCCCGTG GGTCTACGGCGAGCGCGGCAACTGGAGCGCTTATGCCATGGGCCAGGCGGTCACTGCCACCGATACCATCGAAACCGATACCCTGCGCCAGAACGACGAT GGCACCACCACCGACACGGGCGCAGACAGTCGTCAACCGGACAAGAGCTACCTGGCCATGCGCGAGTTCTGGGTGGGCTACAGCGGCCTGACCGCCTACC CCGGCGAGCAACTGCGACTGGGCCGGCAACGGTTGCGCAGCGACGATGGCATGTGGCGCGACACCAACATCGAAGCCCTCAACTGGACCTTCGACACCAC CCTGCTCAAGGCCGACCTGGGTGTAGCCCGGCGTTTCAGCGAATACCGAACCGACCTGACCGACCTGGCCCCGCAGGACGAGGATCGTACTCACCTCTAC GGCAATGTCGCTGCCCAGTGGACGCCTGGCCATTGGGTGGGCCTGCGGGCTCATCACACCCACGACAGCGGTAGCCTGAAAAACCCCGGCCAAACCGTCG ACGCTCTGGACAAGACCCGCACCGGCGACCTGACATGGCTGGGCCTGGAGGCCAACAGCGATGCCTACAACTGGCGCAATGAGCATGACGTCAACTACTG GGGCAGCCTGACCTGGCTGACCGGCAACCGCGACACCCTCAGCAGCCGCCAGGTGGGCGACCAGCAAGTGGCCACCGGTACCCAACGCGGCGACGTCAAT GCCTGGGCCACCGACCTGGGCGTACGCCTGCGCCTGAACCCGCAGTGGCAGGTGGGCGCCGCCTACGCCCGCGGCAGCGGCGGCGGTGACGAGGGCGGCA ACAACTTCGAGCAGACCGGCCTTGAAAGCAACCGCTCCAACTTCACCGGCACCCGATCGCGTGTGCATCGCTTTGGCGAGGCCTTTCGTGGCGAGCTGGG CAACCTGCAGGCCGCCACCTTGTTCGCCTCCTGGCAGCTGCGCGACGACTACGACGCAAGCTTCCTCTACCACAGGTTCTGGCGAGTGGACGGTGCGCAG AACATAGGCTCGAGCGGCATCAACGCCGTAGTCAACGACAACGGCATCAACCGGCCTTTGGTCGAGGGTGAGAAAGACCTTGGCCAGGAAATGGACGTGG TCGTGACCAAGTACTTCAAGCAAGGCCTGCTCCCCGCCTCGATGAGCCAGGCGATCGACGAGCCTTCGGCTCTGGTTCGCCTGCGTGCTGGGGTATTCAA GCCGGGCGATGCCTACGGCAAAGAGGCAGACAGCTACATGCACCGCGCCTTCGTCGACGTGATCTGGCGTTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCACGAGGAAATTGCCATGAACGTTCATCCCCATCTTCGCCATAGCCTGCTGGCCTGCGCCCTGCTGCTTGCCAGTGGTTCGACCTGGGCGGCGCAAC CCGGCCTGCTGACCAAGGAACTGCAACAGGCGCGCAGCTATACCGTCTCTAGCGCACCGATAGCGCCGCTGCAGCTGGACGCGCCCAAGCTCCCTGACCT CAGTGGCTACACCGCACAGGCCGTGCAGCAAAAGATCGACCGCAGCCAGCCGGGCAAGGTCAGCCTGCGCCGTATGTTCCAGGAAGACAGCCTCAAGGCA TTCGTCGGTGGCGACAACAAGGCCGCCGAATGGGTGCGGCGCCAACACGGCATTCCACAGGCCATTTTCATCGACGATGGCCACGTGGACCTGGCGCAGT TGAGCCGCCAGGTGCCGCGCCAGTACCTGTCCGAGGTGCAGCCCGGTGTGTACCTGGCGCGTCTGCCCATCGTGGTCGGGCGCACCGGGACGTTGGAGAT
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| Amino Acid Sequence |
>alginate regulatory protein
MMLNPFVKAGIGLGFALLWSCPSLAQVTAERNFGLEVKVTGQSEDDRDLGTRPGGDVNGLGLDLRPWVYGERGNWSAYAMGQAVTATDTIETDTLRQNDD GTTTDTGADSRQPDKSYLAMREFWVGYSGLTAYPGEQLRLGRQRLRSDDGMWRDTNIEALNWTFDTTLLKADLGVARRFSEYRTDLTDLAPQDEDRTHLY GNVAAQWTPGHWVGLRAHHTHDSGSLKNPGQTVDALDKTRTGDLTWLGLEANSDAYNWRNEHDVNYWGSLTWLTGNRDTLSSRQVGDQQVATGTQRGDVN AWATDLGVRLRLNPQWQVGAAYARGSGGGDEGGNNFEQTGLESNRSNFTGTRSRVHRFGEAFRGELGNLQAATLFASWQLRDDYDASFLYHRFWRVDGAQ NIGSSGINAVVNDNGINRPLVEGEKDLGQEMDVVVTKYFKQGLLPASMSQAIDEPSALVRLRAGVFKPGDAYGKEADSYMHRAFVDVIWRF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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