Pseudomonas fulva NBRC 16636 = DSM 17004, Q382_RS0109325
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAATAAGGAAAGCGCCGTGCGTCTGCGCCTGATCGCGGTTGGCTCGCGCATGCCGAAGTGGGTCGAGGAGGGCTGGCATGAGTATGTCAAGCGCCTGCCG GCCGAACTATCGCTCGAGCTGGTGGAAATACCGCTGAACACCCGCGGCAAGAATGCCGACGTCGCCCGCCTGATTCGCCAGGAGGGCGAAGCCATGCTCA GCAAGGTGCAACCCGGGGAGCGCGTCGTAACCCTGGAGGTCCATGGCAAGCCGTGGAGCACCGAACAGCTGGCAGGTGAACTGGACCGCTGGCGCCTGGA TGCGCGCACGGTGAATCTGATGGTGGGTGGGCCCGAAGGGCTTGCGCCGCAAGTGTGCGCCCGCGCCGATCAGCGCTGGTCCCTGTCGCCGCTGACCTTG CCGCACCCGCTGGTCAGGATACTCATCGGCGAGCAGGTCTATCGGGCCTGGACGGTGTTGTCCGGGCATCCCTACCACAAATGAGCCTGTAAGCAGCCCG
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| DNA Sequence for Gene |
>Q382_RS0109325
ATGTCGCAGCCGATCCGCCTCAAGGACCACGAAAAAGACGCCCGTCTGGTGCGCAACCGCGTCGTGGTCGGCGCCGTGGCGGTCATGCTGCTCATCTGCG TGCTGATTGCGCGGCTGTATTACCTGCAGATCATCCAGTACGACTACCACTCCACGCTGTCTGAGAACAACCGGGTGCACGTGCAGCCGATTCCGCCGAC ACGCGGGCTGATCTTCGACCGCAACGGGGTAGTGATCGCCGACAACCGGCCCAGCTTCAGCCTGTCCATGACCCGTGAGCGTGCGGGAGACTGGCAGCAA GTGCTGGACAGCATCGTCGAGATACTGGAACTCACTCCAGACGACCGCGCACTGTTCGAAAAGCGCATGCGCCAGGGACGCAGGCCGTTCGAGCCGGTAC CCATCCTGTTCGAACTCAACGAGGAACAGATCGCCCGTGTGGCGGTGAACCAGTTCCGCTTGCCAGGGGTGGAGGTGGTCGCCCAACTGGTGCGTCACTA TCCACAAGGGGCGCATTTCGCGCATTCGGTGGGCTACGTCGGGCGTATCAACGAGAAAGAGCTCAAAACCCTGGACCCTGTGAACTACAGCGGCACGCAC CACATCGGCAAGACTGGTATCGAGCGGTTCTACGAGGCCACGCTGCACGGCCAGGTCGGCTACGAAGAAGTCGAGACCAACGCCCGCGGCCGTGTGCTCA GGGTGCTCAAGCGTACCGACCCCAAGCCTGGCAAGGACATCGTGCTGAGCCTGGACATCAGGTTGCAGGAAGCGGCCGAAGCCGCCCTGGCCGGGCGCCG TGGTGCGGTGGTGGCGCTCGACCCACGTACCGGCGAAGTGCTCGCCATGGTGAGCCAGCCCAGCTTCGACCCCAACCTGTTCGTCACCGGCATCAGCTTC AAGGCCTATGCCGAACTGCGTGATTCGATCGACAGGCCGCTGTTCAACCGCATCTTGCGCGGCCTTTATCCGCCCGGTTCGACGATCAAGCCAGCCGTGG CCATCGCCGGCCTGGACAGCGGCGCGGTGACCCCGAGCAGCCGTGTGTTCGACCCTGGGTACTACCAGCTGCCCAACTACGATCACAAATACCGTAACTG GAACCGCTCGGGTGACGGCTGGGTGGACCTGGACACCGCCATCATGCGCTCCAACGACACCTACTTCTACGACCTGGCCCACAAGATGGGCATCGACCGG TTGTCCAGCTACATGAACAAGTTCGGCATCGGTCAGCGGGTGTCGCTGGACATGTTCGAAGAGTCCGCAGGGTTGATGCCGTCGCGGGAGTGGAAGCGGG CTACGCGCCGGCAGGCCTGGTTCCCGGGCGAAACCCTGATCCTGGGTATCGGCCAGGGCTACATGCAGGCCACGCCTCTGCAATTGGCCCAGGCGACGGC GCTGATTGCCAACAAGGGTGTATGGAACCGGCCACACCTGGCCAAGACCATCGAAGGGGAACCGCCGGTGGATGAAAACCCGATGCCGGACATCGTGCTG CGCGACAAGGCCGATTGGGCGCGTGTGACCCACGGCATGGAGCAGGTGATGCACGGCGCGCGCGGTACCGCCCGCAAGGCTGCCATCGGTGCCCAGTACC GCATCGCCGGCAAAAGTGGTACCGCACAGGTGGTGGCCATCAAGCAGGGCGAGAAGTACGACCGCAACAAACTTCAGGAACGTCACCGCGACCACGCCTT GTTCGTGGCCTTCGCACCGGCAGAAGACCCCAAGATCGTGGTGTCGGTCATGGTCGAGAACGGCGAGTCGGGCTCTGGGGTGGCCGCGCCTGTGGTGCGC CAGATCATGGATGCCTGGCTGCTGGACGAAAACGGCCGGCTCAAGCCTGAGCTTGCGCCGGTTACCGCTACTCAGGAGTCGCCGCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAACAATTTCGATCGCATGCTCTCCAGCGAGGATGTGATGCGTCGGCGCGCCAGCTTCCTGCAGCGCATCCACGTCGATGGTCCCCTGCTGATCATCCT CCTGACCCTGGCCGCGGGCAGCCTGTTCGTGCTGTATTCGGCCAGCGGCAAGAACTGGGACCTGTTGCTCAAGCAGGCCACCTCGTTTGGCATCGGCCTG GTATCGATGTTCGTCATCGCCCAGCTCGAGCCAAGGTTCATGGCGCGCTGGGTGCCACTGGCGTACCTGACCGGGGTATTGCTGCTGGTGGTGGTGGACG TCATGGGCCACAACGCCATGGGTGCAACGCGCTGGATCAACATACCCGGGGTGATTCGCTTCCAGCCCTCCGAGTTCATGAAGATCATCATGCCGGCAAC CATCGCCTGGTACTTGTCCAAGCGCACCCTGCCGCCGCACCTCAAGCATGTGGCCATCAGCCTGGTACTGATTGGCGTGCCTTTCATTCTGATCGTGCGC
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| Amino Acid Sequence |
>penicillin-binding protein 2
MSQPIRLKDHEKDARLVRNRVVVGAVAVMLLICVLIARLYYLQIIQYDYHSTLSENNRVHVQPIPPTRGLIFDRNGVVIADNRPSFSLSMTRERAGDWQQ VLDSIVEILELTPDDRALFEKRMRQGRRPFEPVPILFELNEEQIARVAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYVGRINEKELKTLDPVNYSGTH HIGKTGIERFYEATLHGQVGYEEVETNARGRVLRVLKRTDPKPGKDIVLSLDIRLQEAAEAALAGRRGAVVALDPRTGEVLAMVSQPSFDPNLFVTGISF KAYAELRDSIDRPLFNRILRGLYPPGSTIKPAVAIAGLDSGAVTPSSRVFDPGYYQLPNYDHKYRNWNRSGDGWVDLDTAIMRSNDTYFYDLAHKMGIDR LSSYMNKFGIGQRVSLDMFEESAGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALIANKGVWNRPHLAKTIEGEPPVDENPMPDIVL RDKADWARVTHGMEQVMHGARGTARKAAIGAQYRIAGKSGTAQVVAIKQGEKYDRNKLQERHRDHALFVAFAPAEDPKIVVSVMVENGESGSGVAAPVVR QIMDAWLLDENGRLKPELAPVTATQESPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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