Pseudomonas fulva NBRC 16636 = DSM 17004, Q382_RS0104920
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva NBRC 16637 = DSM 17717 Q382DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTTGGTTTCATGGGTTAACCAGTGCACCTTGGTGCAGCCGTCCGCGCTCGCCGCCTGATAGACGTGCTGAATCAGTTGGCGGCCAATACCCAAGCCACG CTGCTCGCCAGCCACGTATAGGTCTTGCAGGTAGCAGGCATTCTCGATGCTCCAGTTGGAACGATGGTAGATGAAGTTGACCATGCCCACCGCTTTCTCA TCCAGCCAGGCGAGCGCCGAGTGCGTGGGCTCGCGAGTATCGAGCAGACGCCCCCAGGTCGTGAGACTGACCGTCTCGGACAGTTCTGTCTTGTAGAACT GCAAGTAGGCCTGCCACAGGGCAAGCCAACTGGCGTGGTCGTTGGCAGTTACCGGGCGTACGGTAATGTTCGTCATGGTCTATCCCTTGGCGGCTGGCAC GTGTGCGCAGCCTGTTCGATTGCAGGTATAAGGGTGATGCTATGCACAAGATTGGCTCTCGGTAAGAGCCATTTACTTCGCTTTTGATAGAGCCAATGCC
|
|
| DNA Sequence for Gene |
>Q382_RS0104920
GTGAGCGAGTTGCATCACGATCTTTCCTTCGACCCTGCCGGGATCACGCTAGACCGCCGTCTGGGGCTCAGCCAGCAGTTGTATCAAGCCCTACGGGAAC GAATGCTCGATGGTCGCCTGGGCAGCGGTACTCGGCTGCCTGCAACCCGGGAAATAGCCAGGATGTTGGGCATTTCGCGCAACAGCGTTGTCCAGGCCTA CGAGCAGCTTCACGCGGAGGGTTTCATCGAGTCGCGGGTCGGTGATGGGACCTATGTAGGAACATCGAGCAAACTGTCCACACATCTATCCACAGGCTTA TACCCTGGGTTATCAACAAGGTTATCCACAAACTCTTCGTTTGACACTGAGGATTTATCCAGTTACAGCCGTGCTGATACCGCCTTGCAACTGCTCGAAA AACATCATCTGGCACCCCCCAGAGGTGGCAAGCCACGAGCGTTTCGCGTCGGCCTGCCCGCGTTCGACCTATTTCCTTTCGACGTCTGGGCCAAGCTGCA AGCGGCTTTCTGGCGTAATCCGTCTCCAGCCAGGTTGAGCTATGGGGACCCGGCGGGTGAACCCGCCTTGCGTGAGCTGATCGCTACTTACATGCGCCGT TCGCGAGGGCTGAATTGTACAGCTGCACAAATTGTGATCACCCATGGCGCACAGGACGCCATCAGTCTTTGTTCACAGTTGCTGCTAGGCGCTGGCGATA CCGTGGCTGTGGAAAACCCGGGCTATCGCGCCGCAGGCCATGCCTTTGCTTTGAGCGGAGCTGAGGTAAGGGGTATCGCCGTTGATGCACAGGGAATGGA TTGCACCGAGCTCGAACGGCTGGAAAAATGTCGGCTGGCCTACGTGACTCCGGCTCACCAGTACCCGACAGGTGTCACCATGAGCCTGGCCCGACGCCTA CAGCTGCTGGCCTGGGCCCGCCGTACCCAGGGCTGGATCATCGAAGACGATTACGACGGCGAGTACCGTTACAGCGGTGCGCCCCTGGCGCCCTTGGCTG CGCTGGACCAACATGGACGGGTCCTGTACGTCGGTACCTTCGGCAAGATCGCTTTCCCAGCCCTGCGCCTTGGTTATCTTGTGTTGCCGCCCGCATTGGC CAAACCCTTCAGCCAGGGCAGGGCGCTGGCCTCCCGGCATTCGGAAATCAGCAGTCAATGCGTGATGGCGGAGTTCATGGCGCGTGGGCATTTTCAGCGG CATATAAGGCGCATGCGCAAGGCCGCCCTTGCACGGCGCGACGCGATACTGGCCGGGTGGCCTACCGGTATCCAAGGCATGGGCGCCATGCCGGATATCG CAGCTGGCCTGCATGTCACACTGGCTGTGGATAACGTCAGCCGGGAAAGGGCGTTAGTGGCCCAGGCCGAAGCAGTTGGCGTGGAAGTGACGCCCTTGAG CCATTTTTGGCTGGATGACAGCACGTGCCCTGTGGATAAACGGGCAGGGCTGGTAGTGGGCTTTGCGGCAGTGCCTGAAAGGGAAATCGCCGAGGCCTTG CTGAAGCAACGCAAGGCCTGGCGGTCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGGCGCACCGTGAAGAGCGGCTGGGGCCACGACCCCAGCCGCAGGTGGTCATGATCCGGACTTGATGCGTGTCCATGCCCGTGTGCGTGCGCGCTCTGC ATCGCGAGCCAGTGGCTTTAGCGTATACAGCTTGGTCATTGCATCGGCGGTTGGATACAAGTTGGGGTTGTTGCGAATCGCTGGGCTCACCTTGTCCGTA GCGTCTTTATTCGGGTTCGGATAGCCCACGAAGTCACTGATCGGCGCAATCACTTCAGGCCGGAGCAGGTAATTGATAAAGGCGTGAGCGTCCTGCGGAT TGGCAGCATTTTTTGGAATTGCCAGCATGTCGAACCAGATCGGCGCCCCTTCCTTGGGCAGGCGCATGTCCACCACGACACCGTTGTTGGCCTCGCGGGC ACGGTTGGCAGCCTGCGAGAAACTGCCGCTGTAGCCCACAGCGACGCAGATGTCACCGTTGGCCATGTCTGCCATGTACTTGGAGGAGTGGAAGTAGGTG
|
|
| Amino Acid Sequence |
>GntR family transcriptional regulator
MSELHHDLSFDPAGITLDRRLGLSQQLYQALRERMLDGRLGSGTRLPATREIARMLGISRNSVVQAYEQLHAEGFIESRVGDGTYVGTSSKLSTHLSTGL YPGLSTRLSTNSSFDTEDLSSYSRADTALQLLEKHHLAPPRGGKPRAFRVGLPAFDLFPFDVWAKLQAAFWRNPSPARLSYGDPAGEPALRELIATYMRR SRGLNCTAAQIVITHGAQDAISLCSQLLLGAGDTVAVENPGYRAAGHAFALSGAEVRGIAVDAQGMDCTELERLEKCRLAYVTPAHQYPTGVTMSLARRL QLLAWARRTQGWIIEDDYDGEYRYSGAPLAPLAALDQHGRVLYVGTFGKIAFPALRLGYLVLPPALAKPFSQGRALASRHSEISSQCVMAEFMARGHFQR HIRRMRKAALARRDAILAGWPTGIQGMGAMPDIAAGLHVTLAVDNVSRERALVAQAEAVGVEVTPLSHFWLDDSTCPVDKRAGLVVGFAAVPEREIAEAL LKQRKAWRS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|