Pseudomonas monteilii NBRC 103158 = DSM 14164, Q381_RS0125775
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas monteilii NBRC 103158 = DSM 14164 Q381DRAFT_scaffold00036.36_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGCGCCTAAAGAACGCGTCAATATCAAATACGTCCCCGCTACGAGCGATGAGCAAGCTGAGGTGGAGCTGCCCCACAAAATGCTGGTACTGGGCGACT TCGGCCTGGATGAAGATCGCGCGCTCGAGGACCGCCAGGTGATGCGTGTCGACAAACACACGTTCAACAGCGTGTTGAACGACGCCAACGTGAGCCTGGC GGTATCTGTGCCTTCCGTGCTCAGTGCAGCCCCGGATGCCGAGCTGGCGGTCCATCTGCAGTTCAGGTCCATCAACGATTTCGGGCCGGACCGTATCGCG CGGCAGGTACCCGAGCTGAACAAGCTGCTGGAACTGCGCGAAGCGCTGGTTGCCCTGAAAGGCCCGCTTGGCAACGTCCCGGCCTTCCGCAAGCAACTGC AACACCTGCTGAACAACGAGCAAGCCCGTAAACAGCTCGCACTAGAACTGGACCTGGTACCTGAAGCGCCAGAAAAAGACTGAGACAACGGAGCGTCCCC
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| DNA Sequence for Gene |
>Q381_RS0125775
ATGCCTAAGCCAAACACCACCACCGTCACCACAGACGCAACCATAGACACATTGGGCAATGGCACTTTGCTCGACCAGATCATGGCAGAAACCAAACTGG TACCTACGCAGGAGGGCTATCAGGTTGCCAGGCAGGGCGTATCTGCCTTCATCGCCGAAATCCTCAAAAGCAACGACCCGGATCAACTGATCAACAAGCA CCGGGTCGATCAGATGATTGCAGAGGTTGACCGGGTTCTCGGCAAACAGATGGACGCCATTTTGCACCAACCCGAGTTCCAGCGGCTTGAATCCTCATGG CGTAGCCTGAAACTTCTGGTCGACCGCACGAACTTCAGGGAGAACATCAAGCTCGAAATTTTGCACATCAGCAAAGAGGACTTGCTCGACGACTTCGAAA ATGCAGCAGACATTACCTGCAGCGGCCTCTACAAACATGTTTACACCGCCGGGTACGGCCAGTTCGGGGGAGAGCCGGTTGCGGCCATGGTAGGTAACTA CAACTTTGGCCCCGCCTCTGCGGACATCAAACTTTTGAGTTACATGGCCTCCGTAGGTGCCATGTCCCACGCGCCCTTCCTGGCCGCACCTTCCCCCGAG TTCTTCAACTTGAGCAGCTTTGAAGAGTTGCCCAACCTCAAGGAAATAAAAGACCTCTTCGCCGGCCCACGTCATGCCAAGTGGCGCGCTTTTCGCGAAA GTGAAGACGCCCGTCATGTCGCGCTGACCGGACCGCGCTTCATGCTGCGCTCCGCCTACCACCCGCAAGAAAAGCCAATCGAGAGCTTCAATTACAACGA AGACATCGCCGGGCGGCATGACCACTACCTGTGGGGCAATTCCGCCTTCCTGCTGGCCAGTTGCATCAACGACAGCTTCGCCCGCTACCGCTGGTGCCCG AACATCATCGGCCCGCAATCGGGTGGTGCGGTCGAAGACCTGCCAGTCCACCTGTACGAGTCACTGGGGCAATTGCAGGCCAAGATTCCTACCGAGGTGC TGATTTCCGATCGCAAGGAGTTCGAGCTCGCCGAAGAGGGCTTCATCGCCCTGACCATGCGTAAAGACAGTGACAATGCAGCGTTCTTCTCAGCCAACTC GGTGCAAAAACCCAAGAACTTCCCTAAAACCCCCGAAGGGCTGCAGGCACAGACCAACTACAAGCTGGGAACCCAGCTGCCCTACCTGTTCATCGTCAAC CGCCTGGCCCACTACATCAAAGTGCTGCAACGCGAACAGATCGGCAGCTGGAAGGAACGCCGAGACCTTGAGTCCGAGCTGAACAAGTGGATCAAGCAGT ATGTCGCCGACCAGGAAAACCCGTCTGCCGACGTTCGCAGCCGCCGGCCGCTACGTGCCGCCCGTATTGAGGTCTCGGATGTTGCCGGTGACCCAGGCTG GTACCAGGTTTCGATCGCCGTGCGTCCGCACTTCAAGTACATGGGCGCGAACTTCGAGATCTCTCTGGTCGGGCGGCTCGATACGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGGTTTTTTTGAACGCTTGACGGTGGATCAGAGTACCCGTCCGCAGGCCACTCGACAGGAAAGCGCTGCGCACACGTTCGCCACCATCAAGCGCCATCT CGAAACGCTGCTCAACGCCCGCCAGGGTTGCTCTCAGAGCAGTCCTGAGCTGGGCTTGCGTGACTTCAACGGGCATGACGTGAACCGCGGCGACTTGCTC GTACAAGTGAGCGCGGATATTCGCCGCACCCTCCAGCGCTTCGAACCACGTATCCAGATACGCACGCTCAAGGCAGTGCCCGATACCCATGCCCCGCTGG AGCTGCATTTCAGGCTCGATTGCCAGGTGCAGGTCAACAACCACGCAGAGCAGCTGCAACTCGAGCTGCTGGTCAACGGGCACAACCGCTACACCCGAGT GAGGTGACCGATGTCACTGAAAGACCGTTTCAGCGAAGAGCTGCGTTACCTGCACGAACTGGGGAGCGACTTCGCCAAGGACAACCCGCAACTTGCAAGA
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| Amino Acid Sequence |
>EvpB family type VI secretion protein
MPKPNTTTVTTDATIDTLGNGTLLDQIMAETKLVPTQEGYQVARQGVSAFIAEILKSNDPDQLINKHRVDQMIAEVDRVLGKQMDAILHQPEFQRLESSW RSLKLLVDRTNFRENIKLEILHISKEDLLDDFENAADITCSGLYKHVYTAGYGQFGGEPVAAMVGNYNFGPASADIKLLSYMASVGAMSHAPFLAAPSPE FFNLSSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHVALTGPRFMLRSAYHPQEKPIESFNYNEDIAGRHDHYLWGNSAFLLASCINDSFARYRWCP NIIGPQSGGAVEDLPVHLYESLGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAFFSANSVQKPKNFPKTPEGLQAQTNYKLGTQLPYLFIVN RLAHYIKVLQREQIGSWKERRDLESELNKWIKQYVADQENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSIAVRPHFKYMGANFEISLVGRLDTQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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