Strain | Pseudomonas monteilii NBRC 103158 = DSM 14164 Q381DRAFT_scaffold00031.31_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGTCGGCAACCTCGTCGCTGAGGGTCAGGTCGACCAGCACTTGAGGATAACGCGCGCTGAACGCTGCCAGCAGCGGCACCACGGTCAGGCGGCCATGGCC AAGCGCCGCGCTGACCCGCAAACGTCCGCGTGGCACGCCTTGGTCGGTGATGGCGTCCTCTAGCTCCAGCATGTCGGCCAGCACCCGCCGCGCACCGCGC AGGTAGGCCTCACCCTCGGGGGTGAGGGTGATCGCCCGGGTGGTGCGCAGCAGCAGGCGCGTGCCCAGGCGCTGTTCGGTGCGGGCGAGGATGCGGCTGA CAGCAGAAGGTGTCAGGCCCAGTGCCCGGGCGGCGGCGGACAGGCTGCCTTCTTGCGCCACCCTGGCAAAAATCTCCATCTCTCCGGATCTTCCACTGAA GTCCATTTGTGTCTCGCAGGCAAAGGTGATTCGCAAAAACGCAGTCTAGTGCGGTTTTTAAACACTTTGTAGCATTTGCGGCATAGATAAGGAGCTTGCC
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DNA Sequence for Gene |
>Q381_RS0124655
ATGCGTATCAATCCACCTCTGGTCGCACTCGCCATCGGTGCCTTCGGCATCGGTGTCACCGAGTTCGCCCCCATGGGCATGTTGCCCAGTATCGCCACCG ACCTTGGCGTTTCCATTCCTGCTGCAGGGCTGTTGGTCAGTGCCTATGCCATCGGTGTGCTGATTGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGAT CCCGCGACGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCCGCGCTGGCCAGTGACTACGCCAGCCTGCTGGTGGCCCGG GTGGTCACTTCGTTGAACCACGGCGCATTTTTCGGCATCGGCTCGATCGTTGCGGCCAGTGTGGTGCCGCCCGAAAAGCGGGCTGGTGCCGTGGCGGCGA TGTTCATGGGCTTGACCCTGGCCACCATCGGAGGGGTGCCGCTGGCGACCTGGTTTGGTGAAATGCTGGGCTGGCGCACAGCGTTCTGGGGTATTGCCGG GCTTGGCCTGGTGGCGATGACCACGCTCTGGTATGCGCTGCCCAATGTTGCATTGCCCAAGGGTGATGGGGCCATGGCAGAAATCCGCGTGTTGGGCCGC GGCCCGGTATTGGCGGCCTTGCTGCTGACCGTGGTGGGTTCCAGTGCAATGTTTACTGTGTTCACCTACATCGCGCCAATCCTGCAGAACGAGGCGGCGG CGTCTACCACCTTCGTGACAGTCATGCTGGTGCTGTTCGGGGTGGGCCTGACCTTGGGGAATATGTGGGGTGGCAAGGCGGCGGACCGCTCTATCGATCG CACGCTGATGCTGTCGTTGGCGGTGCTGATTGCGGTGCTGCTGGTGTTTCCGCTGGTTCTGGCCTGGCCACTGCCGACGGCTTTGGCGGTGCTGGTCTGG GGGGGCGCCAGCTTTGCCCTGGTGCCGCCGTTGCAGATGCGGGTGATGGAAGCGGCCAAGGATGCGCCCAACCTGGCGTCGGCGGTGAACATCGGCGCGT TCAACCTGGGCAATGCGATTGGCGCGGCGCTCGGTGGCGCGGTGATCAATGCAGGGTTGGGTTACTCGGCGATTGCCCTGGCAGGGGCGGCGATGGCGGC TTTGGGGCTGGTGATGGTGCTGCTGTTTGCCTGGCGTGGTCGGGGGGTGGCGGCCCAGGTTGCGGTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAAGCGGGTATCGCCGGGGCTGCACGTAGCCCCGGCGTCTTCCTTTTTGCTGTTAGGGCGTGCCGTTGCGACCATGCAGGTGATAGGCCGGGCGCTCGCT CAGGCGCTCGTAGTAATCACGTACGGCCGGCAAGTGCGGGTGCTCGAACGGTGTTTCGAACCAGCGGTTGACCGACAGGCCAACAGGGATGTCGGCCAGG GTGAACTGGCTGCCGGCCACATAGGCACCGGTGCTGGCCAGCTGGCGGTCGAGGATGTGCATGTAACGTGACCACTCGGCGCAGCCGGCGGCAAGCGCCT GTGGGTCCTGGTGGGCGGGCGAATGCCTGACCAGCGACATGAATGCATAGCTCCAGGAGCGGTTCAGGTCCGAGGCCTGCCAGTCGATCCACTGGTCGAT CCTGGCCCGTGCCTGCGCCTCGCTCGGGTAGAACGCGGTGGCACCGTAGCGGTTGGCCAGGTAGCGGATGATGCTGTTGGACTCCCACAGCGTAAAGTCG
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Amino Acid Sequence |
>MFS transporter
MRINPPLVALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLMTLATVKIPRRYLLIGLMAIFTLGNLMSALASDYASLLVAR VVTSLNHGAFFGIGSIVAASVVPPEKRAGAVAAMFMGLTLATIGGVPLATWFGEMLGWRTAFWGIAGLGLVAMTTLWYALPNVALPKGDGAMAEIRVLGR GPVLAALLLTVVGSSAMFTVFTYIAPILQNEAAASTTFVTVMLVLFGVGLTLGNMWGGKAADRSIDRTLMLSLAVLIAVLLVFPLVLAWPLPTALAVLVW GGASFALVPPLQMRVMEAAKDAPNLASAVNIGAFNLGNAIGAALGGAVINAGLGYSAIALAGAAMAALGLVMVLLFAWRGRGVAAQVAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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