Strain | Pseudomonas monteilii NBRC 103158 = DSM 14164 Q381DRAFT_scaffold00023.23_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGACTACGCGATCCAGGCGATCAAGGAAATCCTCGAAACCGAGATCCCGGTATTCGGCATCTGCCTCGGCCACCAGTTGCTGGCCCTGGCTTCCGGCGC CAAGACCGTGAAAATGGGCCACGGCCACCACGGTGCCAACCACCCGGTCCAGGACCTGGACACCGGCGTGGTCATGATCACCAGCCAGAACCACGGCTTT GCCGTTGACGAGGCCACCCTGCCGGGCAACGTCCGCGCCATTCACAAGTCGCTGTTCGACGGCACCCTGCAGGGTATCGAGCGCACTGACAAGAGCGCGT TCAGCTTCCAGGGCCACCCTGAAGCGAGCCCAGGCCCGACCGACGTCGCGCCACTGTTCGATCGTTTCACCGATGCCATGGCCAAGCGCCGCTGAGCATC CTGCTTCAAGGCCCCGGGCCGGCTCGCGCCGCGCCCGGAAGCGCCTGACCCAGATTGTTCAAAGCGGCTTGCCGACTGACCCCGGATTTGAGTGACAACC
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DNA Sequence for Gene |
>Q381_RS0122040
|carB
ATGCCAAAACGTACAGACATCAAAAGCATCCTGATTCTCGGCGCTGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCTT GTAAAGCCCTGCGCGAGGAAGGTTTCCGCGTCATCCTGGTGAACTCCAACCCAGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA GCCGATCAAATGGCAGTCGGTGGCCAAGATCATCGAGAAAGAGCGCCCAGACGCCGTCCTGCCGACCATGGGTGGCCAGACCGCACTGAACTGCGCCCTG GACCTGGAGCGCCACGGCGTTCTGGAGAAGTTCGGCGTAGAGATGATCGGTGCCAACGCCGACACCATCGACAAGGCCGAAGACCGTTCGCGCTTCGACA AGGCCATGAAGGACATCGGCCTGGAGTGCCCGCGCTCCGGTATCGCCCACAGCATGGAAGAGGCCAATGCGGTCCTCGAGAAGCTCGGTTTCCCATGCAT CATCCGCCCGTCGTTCACCATGGGCGGTACGGGGGGTGGTATCGCCTACAACCGTGAAGAGTTCGAAGAAATCTGCACCCGTGGTCTGGACCTGTCGCCG ACCAAAGAGCTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTCCGTGACAAAAAGGACAACTGCATCATCGTATGCTCGA TCGAGAACTTCGACCCGATGGGCGTGCACACCGGTGACTCGATCACCGTTGCTCCGGCACAGACCCTGACCGACAAGGAATACCAGATCATGCGCAACGC CTCGCTGGCGGTGCTGCGTGAAATCGGTGTTGAAACCGGCGGTTCCAACGTTCAGTTCGGTATCTGCCCGAACACCGGCCGCATGGTCGTGATCGAGATG AACCCGCGTGTGTCGCGTTCCTCGGCACTGGCCTCCAAGGCTACCGGCTTCCCGATCGCCAAAATCGCTGCCAAGCTGGCCATTGGTTACACCCTCGACG AACTGCAGAACGACATCACCGGCGGCCGCACCCCGGCGTCCTTCGAGCCGTCGATCGACTACGTCGTCACCAAGCTGCCACGCTTCGCCTTCGAGAAATT CCCGAAAGCCGACGCCCGCCTGACCACCCAGATGAAGTCTGTGGGTGAAGTCATGGCCATCGGCCGTACCTTCCAGGAATCCCTGCAGAAAGCCCTGCGC GGCCTGGAAGTCGGTGCCTGCGGCCTCGACCCGAAAGTCGACCTGGCCAGCCCGGAAGCTGCCGGCATCCTCAAGCGCGAGCTGACTGTGCCGGGTGCCG AGCGTATCTGGTACGTGGCTGACGCCATGCGTTCCGGCATGACCATCGAGGAAATCTTCGAGCTGACCGGCATCGACCTGTGGTTCCTGGTGCAGATGGA AGACCTGATCAAGGAAGAAGAGAAGGTCAAGACCCTGGCCCTGTCGGCGATCGACAAGGACTACATGCTGCGCCTCAAGCGCAAGGGCTTCTCGGACCAG CGTCTGGCCAAGCTGCTGGGCATCACCGACAAGAACCTGCGCCGTCACCGCCACAAGCTGGAAGTGTTCCCGGTCTACAAACGCGTCGACACCTGCGCCG CCGAGTTCGCCACCGACACCGCCTACCTGTACTCCACCTACGAGGAAGAGTGCGAGGCCAACCCGTCGACCCGCGACAAGATCATGATCCTGGGCGGTGG CCCGAACCGTATCGGTCAAGGTATCGAGTTCGACTACTGCTGCGTACACGCCGCACTGGCGCTGCGTGAAGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACCGACTACGACACCTCCGACCGCCTGTACTTCGAGCCGCTGACCCTGGAAGACGTGCTGGAAGTTTGCCGCGTCGAGAAGC CGAAAGGCGTGATCGTGCACTATGGCGGCCAGACGCCGCTGAAACTGGCCCGCGCCCTGGAAGAAGCCGGCGTACCGATCATTGGTACCAGCCCGGACGC TATCGACCGCGCCGAAGACCGTGAGCGCTTCCAGCAGATGGTTCAGCGCCTGAACCTGCTGCAGCCGCCAAACGCCACCGTACGCAGCGAAGAAGAAGCC ATCAGCGCTGCTGGCAGCATCGGTTACCCGCTGGTGGTGCGCCCGTCGTACGTCCTGGGTGGCCGCGCCATGGAAATCGTCTACGAACTGGACGAGCTCA AGCGCTACCTGCGTGAAGCCGTACAGGTGTCCAACGACAGCCCGGTACTGCTCGACCACTTCCTCAACTGCGCCATCGAGATGGACGTGGACGCCGTGTG CGACGGTACCGATGTGGTGATCGGCGCAATCATGCAGCACATCGAGCAGGCCGGCGTTCACTCCGGTGACTCGGCGTGCTCGCTGCCACCTTACTCGCTG AGCAAGGAAGTGCAGGACGAAGTTCGCGTACAGGTCAAGAAAATGGCCCTGGAGCTGGGCGTCGTCGGCCTGATGAACGTGCAGTTGGCCCTGCAAGGCG ACAAGATCTATGTGATCGAAGTCAACCCGCGCGCCTCGCGTACCGTGCCGTTCGTGTCCAAGTGCATCGGCACTTCCCTGGCCATGATCGCCGCCCGCGT GATGGCTGGCAAAACCCTGAAAGAGCTGGGCTTCACCCAGGAAATCATCCCGAACTTCTACAGCGTCAAGGAAGCCGTCTTCCCGTTCGCCAAGTTCCCA GGGGTTGACCCGATCCTCGGCCCTGAGATGAAATCGACCGGTGAAGTCATGGGCGTGGGTGACAGCTTCGGTGAAGCCTTCGCCAAGGCCCAGATGGGTG CCAGCGAAGTGCTGCCGACCGGCGGTACCGCGTTCATCAGCGTGCGTGACGACGACAAGCCACAAGTGGCTGGCGTTGCTCGCGACCTGATCGCCCTGGG CTTCGAAGTGGTTGCAACTGCTGGCACCGCCAAGGTTATCGAAGCGGCTGGCCTGAAAGTGCGCCGTGTGAACAAGGTGACCGAAGGTCGCCCGCACGTG GTCGACATGATCAAGAACGACGAAGTGTCGCTGATCATCAACACCACCGAAGGCCGTCAGTCGATCGCCGATTCCTACTCGATTCGTCGCAATGCGCTGC AGCACAAGATTTACTGCACCACTACCATTGCGGCCGGTGAAGCCATCTGCGAAGCGCTGAAGTTTGGTCCGGAAAAGACCGTTCGTCGCTTGCAAGATCT GCATGCAGGACTGAAAGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCATTACCAAGTACCCGATGACCGTCCAGGGCGCTCGCGCCCTGGAAGAGGAGCACCTGTTCCTGAGCAAGACCGAGCGCCCGCGCCTGAGCCAGGCAAT CGGCGAAGCGCGCGAACTGGGTGACCTCAAGGAAAACGCCGAATACCATGCCGCCCGCGAAGAGCAGGGCATGGTCGAAGCGCGTATCCGCGATATCGAA GGCCGCCTACAGAACTCGGTGGTGATCGACGTGACCACCATCCCCCACACCGGCAAGGTCATCTTCGGTACCACCGTAGACCTGGAAAACACCGAGACCG GTGACCAGGTGACCTACCAGATCGTTGGCGAGGACGAAGCCGACATCAAGAAGGGCAAGCTCTCGGCCGGTGCGCCGATTGCCCGTGCCATCATCGGCAA GGAAGAAGGTGATATTGTCGTCGTCAAGACGCCTAGTGGCACGGTCGAGTACGAGATTGTCGAAGTCAAGCACATCTGACCGGCGCCTGCGGGCGCCGTC
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Amino Acid Sequence |
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMADATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCAL DLERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGGIAYNREEFEEICTRGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGACGLDPKVDLASPEAAGILKRELTVPGAERIWYVADAMRSGMTIEEIFELTGIDLWFLVQMEDLIKEEEKVKTLALSAIDKDYMLRLKRKGFSDQ RLAKLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFATDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLARALEEAGVPIIGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEEEA ISAAGSIGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL SKEVQDEVRVQVKKMALELGVVGLMNVQLALQGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVSLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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