Strain | Pseudomonas monteilii NBRC 103158 = DSM 14164 Q381DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGCCATGGCCCGCGCCCCTGAAGACCTGTCGAAAAAATTCCGCTACAACCAGCGCCGCGAACTGCGCCTGCTGGAAGAAGCAGGTGGCGTGGTACGCC CGATCAGCGACTTCAGTGCGCAGGAAATCGCCAGCATGTACTGCGACCTGTTCCAGCGCCGCTGGGGCTTCCCGGCCACCGGTGCCGAGCACATGGCCCA GGTGCTGGAGCGCCTGCAAGCGCTGCTGATCGGCTCGGTACTGCTGCTGGATGGCAAGCCGATTGCCATTCAGCTGGTGTACCGCGTCGAAGCGCCGGAA TGGATCAGCGTCGAGTACATCAATGGCGGCGTAGACCCTGAAACCAAGGCTTTCAGCCCGGGTAGCGTGCTGAGCTTCCTCAATACCCAGGCCGCCTGGG AAGACGCCCGTGCGCGCAACAAGCCACTGCGGTTCTCGTTCGGCCGTGCCGACCGCGAGTACAAGGACCGCTGGTGCAACCCTGTGCCGGTGTACCAGGC
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DNA Sequence for Gene |
>Q381_RS0101510
GTGAGCCGCAAGCAGCAGTTGCTCAAGCGCCACCGGCGCAACAAGCGCCTGGGCTTGCTGACGGGCCTGGTTGCGTTGGTCGCCTTGGGGGTTTTCAGCT GGTGGTGGCTGCCACTGCTGCTGTTGCCGCTGGTCTGGGCGGCTCACGAAGCTTGGTTTGCCGACCATCTGTTCTACGCCCCGGGCGAGGATTACGCCTA CGACTTCGGTGAACAGGCGCGGGAAGTGCCTGCCAGCCTGCGCGATGGCCAGCTCCAGGCCGATTGCGTGCTGCAGGGTGACGAAACCCTCATGCTTGAG CTGCAGGTAAAAAGCTCCTGGCTGGGGCGGTTTCTCGACCCTCGGGTAGAGCTGGGCGCTGCTGAGCAGGCTGACCGGCAAACGTTCGAGCGTGGTGTCG ATGGCGTACGGTTTCTCAACCTGACCGGCCTGGCCGTGCCCTTGCAAGCGGGTACCTTGCGCCTGCGCGGTCGTCATTGCCGGCTGCAAGGCCAGCCGCG CCTGTGGATAACCCCCGCTGTCGAGCTGCAACGTCGCCGAGTGATGGTGATCGCGCCGCACGCCGATGACGCCGAGCTGGCTGCATATGGCCTCTACAGC CAAGCCGACGAAACCTGGGTGGTCACCCTGACAGCTGGCGAGATCGAAGCCGAACACTACCAGCAGATGGGCCTGGCAAAAGCCGAGGCCGCCCGCCTGA AGGGCCGCTTGCGTGCCTGGGACAGCATCGCTGTGCCCCGCTGGGCTGGTGTGCCGGAGTCACGTTGCGTGCAGTTGGGTTACTTCTGCCTGCAACTGCC TGCCATGCAGGCCGCGCCCGATCAGCCGGCTGCTTCCCGTGAAGCTGACCTGGCCGATATCCGCGTGTTCCGCCAGTTCAACCCGTTCCTGCTACCGGCC GACCGCGATGGCGCGCCAACCTGGCACAACCTGCTGGCCGACCTGCGGGCCTTGCTGGAAATGGCCAAGCCGGAAGTGTTGGTGATGCCGCACCCACAAC TCGACCCGCACCCCGATCACATCTGCGCCCAGGCGGCCGTGCTGGAGGCCCTGCAAGGCCTGGCCTGGCAGCCGCAGACCTTGTTGTGCTACGCCAATCA CCTGCACGACAACGACCGCTGGCCGATGGGCGACAGTGGCGACGGCGTGGCCTTGCCGCCGCAGTTGAGCGCAGCCCAGGCCTGGGCACCCTGCAGCCTG GTGCTGGACCTGGCCACGCAGCGCGACAAGGCCATGGCCCTGGGCATGATGCACGACTTGCAGCCGCCGGCGCCCTTCAAGCGCCGCTTGCGCCGCCTGC TGCAGCGCTGGCTGGCCGGGCGGCAGCCCTCGCCTTACGGGGAGAACGAGTTCTTCCGCAAGGCCGTGCGCCGGCACGAACTGTTCTGGCGGCGTGAACT GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCACGCCCCATGGTTGACCGCGATGGCGCAGAGCGCCCAAGGAACGTTATGAAAGTCCTATTTCTGGTACAGAAGGAACAGCGGGCTATTCTCGACCGCC TGTACGACGGCGTCGCGGCCAACTGCGAGTGCGACCTGCGCTGGCTGACCAGCGATGACCAGCGCAACCTGCGCCGCTACTTCAAGCGTGAAGTGCAGGT CGAGCGCTATGACCGCATCGTGTTCTTCCTGCGCTTCAAGCAGGAGATTCGCCAGGTGGCTTTCATCCGCACCGTGCCGAACCTGGTCATCCTGGAGCAC GATGCCTACCAGAACTACATCCCGTGCAAGTACACCGGAAAGTTCAGCGCCCATTACCGGCAGCTGCCATGGGCGCGGGTCATCAGCTCGGGCTACATGG TCAGCGAACGCCTGCGCCAGGAAGGCTTCGATGCGGTATTCGTGCCCAAGGGCTATGACGAGCAACTGCTGGCCGACCAAGGGCGTGAGCGCGATATCGA
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Amino Acid Sequence |
>GlcNAc-PI de-N-acetylase
MSRKQQLLKRHRRNKRLGLLTGLVALVALGVFSWWWLPLLLLPLVWAAHEAWFADHLFYAPGEDYAYDFGEQAREVPASLRDGQLQADCVLQGDETLMLE LQVKSSWLGRFLDPRVELGAAEQADRQTFERGVDGVRFLNLTGLAVPLQAGTLRLRGRHCRLQGQPRLWITPAVELQRRRVMVIAPHADDAELAAYGLYS QADETWVVTLTAGEIEAEHYQQMGLAKAEAARLKGRLRAWDSIAVPRWAGVPESRCVQLGYFCLQLPAMQAAPDQPAASREADLADIRVFRQFNPFLLPA DRDGAPTWHNLLADLRALLEMAKPEVLVMPHPQLDPHPDHICAQAAVLEALQGLAWQPQTLLCYANHLHDNDRWPMGDSGDGVALPPQLSAAQAWAPCSL VLDLATQRDKAMALGMMHDLQPPAPFKRRLRRLLQRWLAGRQPSPYGENEFFRKAVRRHELFWRREL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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