Pseudomonas monteilii NBRC 103158 = DSM 14164, Q381_RS0100880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas monteilii NBRC 103158 = DSM 14164 Q381DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTGTGCGGCGGCGAGCGTCTGACTGCCGGTGACTTCGCCAAGGGCGCCTTCGTGGCCCCGACCGTGTTCACCGACTGCACCGACGACATGACCATCGT CAAGGAAGAAATCTTCGGCCCGGTGATGAGCATCCTCACCTACGAAACCGAAGAAGAAGTGATCCGTCGTGCCAACGACACCGAGTACGGCCTGGCCGCC GGTGTGTGCACCAACGACATCACCCGCGCCCACCGCATCATCCACAAGCTGGAAGCCGGTATCTGCTGGATCAACGCCTGGGGCGAATCGCCGGCCGAAA TGCCGGTCGGTGGCTACAAGCAGTCGGGCGTCGGCCGTGAGAACGGCGTCAGCTCGCTGGCTCAATACACCCGCATCAAGTCGGTCCAGGTCGAGTTGGG CGGCTACAACTCGGTCTTCTAAGGCCCAGTCCAGCCACGCCCGTGCCGCTGCGCACGGGCGTTCCCGCTCCCTGATCACCGCCAACACGAGGGTACTTTC
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| DNA Sequence for Gene |
>Q381_RS0100880
ATGTCCCAAGAATTCGATTACATCATCGTCGGCGCAGGCTCCGCCGGTAACACCCTGGCGACCCGCCTGACCGAAGACGCCGGCGTTACCGTACTGCTGC TGGAAGCCGGTGGCCCCGACTACCGCTTCGACTTCCGCACCCAGATGCCAGCCGCACTGGCTTTCCCGCTGCAGGGCCGCCGCTACAACTGGGCCTACGA GACCGACCCGGAGCCGTACATGGACGGCCGCCGCATGGAATGTGGCCGCGGCAAGGGCCTGGGCGGCTCGTCGCTGATCAACGGCATGTGCTACATCCGC GGTAACGCCATGGACTTCGACGGCTGGGCAGAACTGCCAGGTCTGGAAGACTGGACCTACCTGGACTGCCTGCCGTACTTCCGTAAAGCCGAAACCCGCG ACATCGGCCCGAACGACTATCACGGCGGCGAAGGCCCGGTCAGCGTGACCACGCCAAAAGCGGGCAACAACCCCCTGTTCCACGCCATGATCGAAGCCGG CGTGCAGGCCGGTTACCCGCGCACCGAAGACCTCAACGGCTACCAGCAGGAAGGCTTCGGTCCCATGGACCGTACCGTGACCAAGAACGGCCGCCGTTCC AGCACCGCCCGTGGCTACCTGGACCAGGCCAAGAAGCGCCCGAACCTGACCATCGTCACCCACGCCCTGAGTGACCGCGTGCTGTTCGACGGCAAGCGCG CCGTTGGCGTGACCTACCTGGTCGGCGACAGCGAAGAGCGCGTTGAAGCCCGTGCGCGCAAGGAAGTGATCGTCAGCTCCGGCGCCATCGCTTCGCCGCA ACTGCTGCAACGTTCCGGCGTCGGCCCGCGTGCCCTGCTGGAAAGCCTCGACATCCCGGTGGTGCACGACCTGCCGGGCGTTGGCGAAAACCTGCAGGAC CACCTGGAGCTATACCTGCAGTACGCCTGCACCCAGCCGGTGTCGCTGTACCCCTCGCTGCTGTGGTGGAACCAGCCGGCCATCGGTGCCGAGTGGATGT TCAACGGCACCGGCATCGGCGCCAGCAACCAGTTCGAGGCTGGCGGTTTCATCCGTACCCGCCCTGAATTCAAATGGCCGAACATTCAGTACCACTTCCT GCCAGTGGCCATTAACTACAACGGCTCCAATGGCGTGAAGGAACACGGTTTCCAGGCGCACATGGGTTCCATGCGCTCCCCTGCCCGCGGCCGCATCCAG GTCAAATCGAAGGACCCGCGCCAACACCCGAGCATCCTGTTCAATTACATGTCCACCGAGCAGGACTGGCAGGAATTCCGTGACGGCATCCGCCTGACCC GTGAAATCATGGCCCAGCCGGCGTTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCCCACGTGCAAACCGACGAAGAACTGGACAAGTTCATCCG CGAGCACGCCGAAACTGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGATGACATGGCAGTGGTCGACGGCGAAGGCCGTGTGCACGGCATGAAG GGCCTGCGTGTGGTCGATGCGTCGATCATGCCGCTGATCATCACCGGCAACCTCAACGCCACCACGATCATGATCGCCGAGAAAATCTCGGACAAGATCC GTGGACGCAAGCCGCTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGCGATGCACCGGTGAAGGGCAAGCCGATGCGTGAAGTGAAGCAAGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGCAGTACTAATGGGGCTGCTTTGCAGCCCCAAATCACTTGATTGGCTGACATCAAAGATGTGTCACGTCGGTACCGCAAAAAACGTACGCATCAACCC GTCATCCTCCACACCCAATCGTTCAGCCATCACCTGACGGTCGAACAAGGCCCCCGTGCGCATCTCACGCACCCTCGCCCCCTCCGGCGCCCGCGCCAGT GCCTTCAGGCACACTTCCATGAAGCGATGATTGCCTCCCTTCACCGGCGTCAGCTTTTCAACCTGCAAATAACGCCCCGGCATCATCAGCGACTCTGCCT CGTCCGGACGCCTTGAGAACGGCCCGATCGGCATTGCCTGCACGTTCTCACCCGGCTCCAGCACATACACCAACGCATTGTCGCCAAAAGCCCCCTTGCC GCTCGCCTGGGTCTGCGGGTCGTTGAACACCTCCCACAGGGCATAAGGGTTTTCTGTGAACGACGTGAAATCGCTGGTCACCAACACGTCGCCCACTGCA
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| Amino Acid Sequence |
>choline dehydrogenase
MSQEFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNWAYETDPEPYMDGRRMECGRGKGLGGSSLINGMCYIR GNAMDFDGWAELPGLEDWTYLDCLPYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMIEAGVQAGYPRTEDLNGYQQEGFGPMDRTVTKNGRRS STARGYLDQAKKRPNLTIVTHALSDRVLFDGKRAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGVGENLQD HLELYLQYACTQPVSLYPSLLWWNQPAIGAEWMFNGTGIGASNQFEAGGFIRTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQ VKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYRGREISPGAHVQTDEELDKFIREHAETAFHPSCSCKMGTDDMAVVDGEGRVHGMK GLRVVDASIMPLIITGNLNATTIMIAEKISDKIRGRKPLPRSTAKYYVAGDAPVKGKPMREVKQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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