Pseudomonas aeruginosa PACS2, A0K_RS22835

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008033 tRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.1270.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0052906 tRNA (guanine(37)-N(1))-methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.1270.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF000386 tRNA_mtase IPR002649 tRNA (guanine-N1-)-methyltransferase TrmD 5 250 1.4E-97
SUPERFAMILY SSF75217 alpha/beta knot IPR029028 Alpha/beta knot methyltransferases 5 249 3.4E-98
Gene3D G3DSA:3.40.1280.10 - IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal 3 170 1.4E-76
PANTHER PTHR46417 TRNA (GUANINE-N(1)-)-METHYLTRANSFERASE IPR002649 tRNA (guanine-N1-)-methyltransferase TrmD 6 248 1.6E-104
FunFam G3DSA:3.40.1280.10:FF:000001 tRNA (guanine-N(1)-)-methyltransferase - - 5 170 4.1E-73
Gene3D G3DSA:1.10.1270.20 tRNA(m1g37)methyltransferase, domain 2 IPR023148 tRNA (guanine-N(1)-)-methyltransferase, C-terminal domain superfamily 171 252 6.9E-35
NCBIfam TIGR00088 JCVI: tRNA (guanosine(37)-N1)-methyltransferase TrmD IPR002649 tRNA (guanine-N1-)-methyltransferase TrmD 5 234 2.7E-97
CDD cd18080 TrmD-like IPR002649 tRNA (guanine-N1-)-methyltransferase TrmD 9 225 0.0
FunFam G3DSA:1.10.1270.20:FF:000001 tRNA (guanine-N(1)-)-methyltransferase - - 171 250 4.5E-38
Pfam PF01746 tRNA (Guanine-1)-methyltransferase IPR016009 tRNA methyltransferase TRMD/TRM10-type domain 27 225 1.8E-64
Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. IPR002649 tRNA (guanine-N1-)-methyltransferase TrmD 1 252 114.841026

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.