Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GACAGCGCCGAAACGATGGACAGCCAGCGCGAACAGAGCGACCTCGGCGAGACGCGTTCGATCCTGGTGTTCCGCCTGGGCGAAGAGTGGTTCGGCCTGG CCACCGGCAGCCTGGTGGAAGTGGCGCCGATGAATCCTATCCATTCCCTGCCGCACCAGCGCTCGCGCGCCCTGCAAGGGGTGACCAACGTGCGCGGCGC GCTGGTCGCCTGCCTTTCCCTCGGCGAACTGCTGGATCTCGAACCCGGCGCCGCGCCGGTCAGCGAGCGCCGGGTGGTTCCGCGCATGCTGATCATTTCC GCCGCCGGCGGTCCGGTGGTGGCGCCGGTGGAGGAAGTCGACGGCATCCATGCGATTCCGCTGGCGCGGATACTGCCGCCCAACCACGCCGACGGCCAGG CCTCGCGCCGGCACGTGGCCGGCGTGCTGCAATGGCGCGAGCGGAGCATCACCCTGCTCGACGAAGGCCCTCTCCTGCAAGCCGTAGCGCGGAGCCTGGC
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DNA Sequence for Gene |
>A0K_RS22630
ATGACCCCGGACCAGATGAGAGACGCGTCGCTGCTCGAGCTGTTCCGGCTCGAGGCGGAGGCCCAGACCCAGGTGCTCAACGCCGGCCTGATGGCGCTGG AGCGCAGCCCGACCCAGGCCGACCAACTGGAAGCCTGCATGCGCGCCGCGCACTCGCTGAAAGGCGCGGCGCGGATCGTCGGGCTGGACGCCGGCGTGCG CGTGGCGCACGTCATGGAGGATTGCCTGGTGGAGGCGCAGGACGGACGCCTGCTCCTGCAATCGGAACATATCGATGCGTTGCTCCAGGGCTGCGACCTG TTGCTGCGTATCGGCACCCCGCCAGCCGGCGACGCAGGCTGGGCCGAAGGCGCCGGGCGGGAAGAGATCGACGGCCTGGTGCTGCGCCTCGAAGGCCTGG TGCGCAGCGGCCTGCCGCTGGCCCGCGCGGAGCTGCCGGCGACGACTCCCGGTCTGCCGGAAGCGGTCCCCGAGGCGCCGCCAGCGGCGTCAGCGGCCGC CAGCGACGACAACGACGAGGAGCCCGCCGGGCAGGCGGGCGGCGAACAGGCCGAGGAGCGCCGCAGCCGGGTCCTGCGGGTCACCGCCGAACGCCTGGAC CGGCTGCTGGATATCTCCAGCAAGTCGCTGGTGGAGTTCCAGCGCATCAAGCCGCTGGCCGATTCCCTGCAACGCCTGCGTCGCCTGCAGTCCAGCGCCA GCCGCGCGCTCGACGTGGTACGCGAGACGGTCCAGGAAACCGCCCTCGACCCGCAGGCCCAGGCCATGCTCGGCGAGGCGCGGCAACTGATTGGCGAATG CCAGCAGATGCTGGTGCAGCACATCGCCGATCTCGACGAGTTCGCCTGGCAGGGCGGCCAGCGTGCCCAGGTGCTCTACGACGCGGCGCTGGCCTCGCGG ATGCGGCCATTCGCCGACGTCCTTAGCGGCCAGGCGCGGATGGTTCGCGACCTGGGCCGCTCGCTGGGCAAGCAGGTGCGCCTGCTGGTCGAGGGCGAAA GCACCCAGGTCGACCGGGATGTCCTGGAAAAACTCGAAGCGCCGCTCACCCACCTGCTGCGCAATGCCGTCGATCACGGTATCGAGGCGCCGGAAACCCG CCTCGCCGCCGGCAAGCCGGCCGAGGGCAGGATCACCATCCGCGCCCGCCACCACGCCGGCATGCTGGTCCTGGAACTGAGCGACGACGGCGGCGGCATC GATCTGCAGCGCCTGCGCGAGACCGTGCTCAATCGCCAGTTCGCCACCGCCGAGACCGTGGCGCAACTGAGCGAGGAGGAACTCCTGGCGTTTCTCTTCC TGCCCGGCTTCAGCATGCGCGAGCAGGTCACCGAGGTGTCCGGTCGCGGCGTCGGACTGGATGCCGTGCAGCACATGGTCCGCCAGTTGCGCGGCGGCGT GCGCATGGAGCAACGCCAGGGGCAGGGAGCGCTGTTTCACGTCGAGGTGCCGCTGACCCTGTCCGTGGTGCGCAGCCTGGTGGTGGAGATCGGCGAGGAG GCCTACGCCTTCCCGCTGGCGCACATCGAGCGCATGTGCGAGCTGGAAGCGGAGGAGATCGTCCAGCTCGAAGGTCGCCAGCACTTCTGGTACGAGGGTC GCCATGTCGGCCTGGTCTCGGCTGCGCAACTGCTGCAGCGGCCCGAGAGCAGCCGCACCGAAGGGGCCATCCCGGTAGTGGTGGTGCGCGACCGCGATGC GGTCTACGGCGTCGCCGTGGAGCGTTTCGTCGGCGAGCGTACCCTGGTGGTGATGCCTCTCGATCCGCGCCTGGGCAAGGTGCGCGACGTTTCCGCCGGC GCCTTGCTGGACGACGGTTCGCCGGTGCTGATCCTGGACGTCGAGGACCTCCTGCATTCGGTCGGCAAGCTGCTCAGCAGCGGCCGCCTGGAGCGCATCG ATCGCAGCCGGCGGCAGGCCGGCGGGGCGCAACGCAAGCGCATCCTGGTGGTCGACGACTCGCTCACGGTGCGTGAGCTGGAACGCAAGCTCCTGCTCGG CCGCGGCTACGACGTGGCAGTGGCGGTGGATGGCATGGACGGCTGGAACGCCCTGCGCTCGGAGCATTTCGACCTGCTCATCACCGATATCGACATGCCG CGCATGGACGGTATCGAACTGGTCACCCTGGTGCGTCGCGACAGCCGCCTGCAGTCGCTGCCGGTGATGGTGGTGTCGTACAAGGATCGTGAGGAGGACC GTCGGCGCGGTCTCGACGCCGGCGCCGACTATTATCTGGCGAAGGCCAGTTTTCACGATGAGGCCTTGCTGGATGCCGTCGTCGTCCTGATCGGAGAAGC ACAGGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGATCGGAATCGTCAATGACATGCCGTTGGCCGTCGAGGCGCTGCGCCGCGCGCTGGCCTTCGAGCCGCAGCACCAGATCGTCTGGGTCGCCAGCAACGG TGCCGAGGCGGTGACCCAGTGCGCCGCCGATACGCCCGACGTGGTGCTGATGGACCTGCTCATGCCGGTGATGGACGGCGTCGAGGCAACTCGTCGGATC ATGGCGGAAAGTCCTTGCGCGATCGTGATTGTTACCGTCGATATCGAGCAGAATGTGCACCGGGTTTTCGAAGCGATGGGATATGGGGCGCTCGATGCGG TGAACACGCCGGCGCTGGGCATCGGCAACCCGCAAACGGCGGCGGCGCCGTTGTTGCGCAAGATTCAGAACGTCGGCTGGCTGATCGGCCAGCGCGATAA CCGTGGCAAGGTCCAGGTGGTGCCGCCGAAGGCCGGCGGGGCGCGCCAGCGTCTGGTGGCGATCGGCGCCTCGGCTGGCGGTCCGGCGTCGCTCGCGGTG
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Amino Acid Sequence |
>chemotaxis protein CheA
MTPDQMRDASLLELFRLEAEAQTQVLNAGLMALERSPTQADQLEACMRAAHSLKGAARIVGLDAGVRVAHVMEDCLVEAQDGRLLLQSEHIDALLQGCDL LLRIGTPPAGDAGWAEGAGREEIDGLVLRLEGLVRSGLPLARAELPATTPGLPEAVPEAPPAASAAASDDNDEEPAGQAGGEQAEERRSRVLRVTAERLD RLLDISSKSLVEFQRIKPLADSLQRLRRLQSSASRALDVVRETVQETALDPQAQAMLGEARQLIGECQQMLVQHIADLDEFAWQGGQRAQVLYDAALASR MRPFADVLSGQARMVRDLGRSLGKQVRLLVEGESTQVDRDVLEKLEAPLTHLLRNAVDHGIEAPETRLAAGKPAEGRITIRARHHAGMLVLELSDDGGGI DLQRLRETVLNRQFATAETVAQLSEEELLAFLFLPGFSMREQVTEVSGRGVGLDAVQHMVRQLRGGVRMEQRQGQGALFHVEVPLTLSVVRSLVVEIGEE AYAFPLAHIERMCELEAEEIVQLEGRQHFWYEGRHVGLVSAAQLLQRPESSRTEGAIPVVVVRDRDAVYGVAVERFVGERTLVVMPLDPRLGKVRDVSAG ALLDDGSPVLILDVEDLLHSVGKLLSSGRLERIDRSRRQAGGAQRKRILVVDDSLTVRELERKLLLGRGYDVAVAVDGMDGWNALRSEHFDLLITDIDMP RMDGIELVTLVRRDSRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDEALLDAVVVLIGEAQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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