Pseudomonas aeruginosa PACS2, A0K_RS22285

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3636
 ECO:0000249
sequence similarity evidence used in automatic assertion		 10220877
Biological Process GO:0015976 carbon utilization
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3636
 ECO:0000249
sequence similarity evidence used in automatic assertion		 10220877
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3636
 ECO:0000249
sequence similarity evidence used in automatic assertion		 10220877
Molecular Function GO:0008676 3-deoxy-8-phosphooctulonate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01362
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00793
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01362
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PACS2 genes in this class
Cell wall / LPS / capsule Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01362 JCVI: 3-deoxy-8-phosphooctulonate synthase IPR006269 3-deoxy-8-phosphooctulonate synthase 18 273 4.7E-114
Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. IPR006269 3-deoxy-8-phosphooctulonate synthase 13 275 48.256344
PANTHER PTHR21057 PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE IPR006269 3-deoxy-8-phosphooctulonate synthase 7 278 1.4E-109
SUPERFAMILY SSF51569 Aldolase - - 3 277 1.01E-101
Pfam PF00793 DAHP synthetase I family IPR006218 DAHP synthetase I/KDSA 9 273 2.4E-80
FunFam G3DSA:3.20.20.70:FF:000058 2-dehydro-3-deoxyphosphooctonate aldolase - - 1 281 0.0
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 1 281 8.8E-114

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.