Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATGCTGGCCTGCCGCGAACGCAGTACCTTCATCCCGATCCTGGCCAACGGCTTCGCCCGGCATACCTGCGAGATCCGCGTCGCCCACGCCGAGCGCGCCC ACGGCGAATCGAAATACAGCGCGATGCGCCTGCTCAACCTGATGTTCGACCTGGTCACCTGCATGACCACCACGCCGCTGCGCCTGCTCAGCCTGGTCGG CGGCGGCATGGCCCTGGCCGGCTTCCTCTTCGCCCTGTTCCTCCTCGTGCTGCGCCTGGCCTTCGGCGCCGCCTGGGCCGGCAACGGCCTGTTCGTGCTG TTCGCCGTGCTGTTCATGTTCAGCGGCGTGCAGTTGCTCGGCATGGGCCTGCTCGGCGAGTACCTCGGGCGCATGTACAGCGACGTGCGCGCGCGGCCGC GCTTCTTCATCGAGCGCGTGGTCCGCGCCACGCCCTCCGCGCTTCCCTCGGCCCTGCAGCGGGCCGGTTTCACCTCTTCATCCAGCGAGCCTTCCACGCC
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DNA Sequence for Gene |
>A0K_RS21860
ATGACCTCGAAAGCCGTCGTCTTCGCCTACCACGACATCGGTTGCACCGGTATCGAAGCCCTGCTCAATGCCGGCTACGAGATCGCCGCCGTCTTCACCC ATGCCGACGACCCACGGGAAAACACCTTCTACGCCTCGGTCGCACGCCTCTGCGCCGAGCGCGGCATTCCGCTGCACGCGCCCGAGGACGTGAACCATCC GCTGTGGCTGGAGCGCATCCGCCAACTGCGCCCGGACTTCCTGTTCTCCTTCTACTACCGCCGCCTGCTCGGCGCCGAGCTGCTCGCCTGCGCCGCACGC GGCGCCTACAACCTGCACGGTTCGCTGCTGCCGCGCTACCGCGGACGCGCCCCGGCGAACTGGGTGCTGGTCAACGGCGAAACGCAGACCGGGGTGACCC TGCATCGCATGATCGAGCGCGCCGACGCCGGGCCGATCCTCGCCCAGCAGGCCGTCGCCATCGACCCCGAGGACACCGCCCTGAGCCTGCACGGCAAGCT GCGCAAGGCCGCCGGTGCCCTGCTGCGCGACAGCCTGCCGCTGCTAGCCCTCGGCGTGCTGCCGGAAGTCGAGCAGGACGAGAGCCAGGCCAGCCACTTC GGCCGGCGCACCCCGGCGGACGGCCTGCTCGACTGGCACAGGCCGGCACGGCAGTTGTACGACCTGGTGCGCGCGGTGACCCAGCCCTACCCTGGCGCCT TCTGCCAGGTCGGCGAACAGAAGCTGATCGTCTGGAGCGCCGAGGTGGTCGCCGGCAACCACGGCCGCGAGCCGGGCAGCGTACTGTCCTGCGACCCGCT GCGGATCGCCTGCGGCGAGGACTCGCTGGTGCTGCGCTTCGGCCAGCGCGGCGAGCGCGGCCTGTACCTGGCCGGCACGCAACTGGCCACCGAGCTGGGC CTGGTCGAGGGCGCGCGCCTGCGTGGCGCGGCATGCAGTCCGCAGCGCCGCACGCGGGTGCTGATCCTCGGGGTCAACGGCTTCATCGGCAACCACCTGT CCGAACGCCTGCTGCGCGACGGTCGCTACGAGGTCCACGGCATGGACATCGGCTCCGACGCCATCGAACGGCTCAAGGCCGACCCGCATTTCCACTTCGT CGAAGGCGACATCGGCATCCATTCGGAGTGGCTCGAATACCATGTGAAGAAATGCGACGTGATCCTGCCGCTGGTGGCCATCGCCACGCCCATCGAGTAC ACGCGCAACCCGCTGCGGGTGTTCGAACTGGACTTCGAGGAAAACCTGCGGATCGTCCGCTACTGCGTGAAATACGGCAAACGCGTGGTGTTCCCTTCCA CCTCCGAGGTCTACGGCATGTGCCAGGACCCGGACTTCGACGAAGACCGCTCGAACCTGGTGGTCGGGCCGATCAACAAGCAGCGCTGGATCTACTCGGT GTCCAAGCAGTTGCTCGACCGGGTGATCTGGGCCTACGGCCAGCAGGGCCTGCGCTTCACCCTGTTCCGTCCGTTCAACTGGATGGGCCCGCGCCTGGAC CGCCTGGATTCGGCGCGGATCGGCAGCTCGCGGGCGATCACCCAGCTCATCCTGCACCTGGTCGAAGGCACGCCGATCCGCCTGGTCGACGGCGGCGCGC AGAAGCGCTGCTTCACCGACGTCGACGACGGCATCGAGGCCCTCGCGCGGATCATCGACAACCGCGACGGCCGCTGCGACGGGCAGATCGTCAACATCGG CAACCCGGACAACGAGGCGAGCATCCGCCAGCTCGGCGAGGAACTGCTGCGCCAGTTCGAGGCCCACCCGCTGCGCGCGCAGTTCCCGCCCTTCGCCGGC TTCCGCGAGGTGGAGAGCCGCAGCTTCTACGGCGACGGCTACCAGGACGTGGCCCACCGCAAACCGAGCATCGACAACGCCCGGCGCCTGCTCGACTGGC AGCCCACCATCGAACTGCGCGAGACCATCGGCAAGACCCTCGACTTCTTCCTCCACGAAGCGCTCCGCGAGCGCGAGGCACAGGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCAGGCCGGCCTGCGCATCGACGTCGACACCTTCCGCGGCACCCGCGACGGGGTGCCGCGGCTGCTCGAGCTGCTCGACGAAGCCGGGCTGAAGGCGAC CTTCTTCTTCAGCGTCGGCCCGGACAACATGGGCCGCCACCTCTGGCGCCTGGCGCGCCCGGCGTTCCTCTGGAAGATGCTCCGCTCGCGCGCCGCCAGC CTGTATGGCTGGGACATCCTGCTGGCCGGCACCGCCTGGCCGGGCAAGCCGATCGGCCGCGAACTCGGCCCGCTGATGCGGCGGACCCAGGCCGCCGGCC ACGAGGTCGGCCTGCACGCCTGGGACCACCATGCCTGGCAGACCCACGCCGGCGTCTGGAGCGTGCAGCAGCTCGGCGAGCAGATCCGCCGCGGCAGCGA TTGCCTGGCGGACATCCTCGGCCAGCCGGTGCGTTGTTCCGCCGCCGCCGGCTGGCGCGCCGACGGCCGGGTGGTCGAGGCCAAGCAGCCCTTCGGCTTC
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Amino Acid Sequence |
>bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MTSKAVVFAYHDIGCTGIEALLNAGYEIAAVFTHADDPRENTFYASVARLCAERGIPLHAPEDVNHPLWLERIRQLRPDFLFSFYYRRLLGAELLACAAR GAYNLHGSLLPRYRGRAPANWVLVNGETQTGVTLHRMIERADAGPILAQQAVAIDPEDTALSLHGKLRKAAGALLRDSLPLLALGVLPEVEQDESQASHF GRRTPADGLLDWHRPARQLYDLVRAVTQPYPGAFCQVGEQKLIVWSAEVVAGNHGREPGSVLSCDPLRIACGEDSLVLRFGQRGERGLYLAGTQLATELG LVEGARLRGAACSPQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERLKADPHFHFVEGDIGIHSEWLEYHVKKCDVILPLVAIATPIEY TRNPLRVFELDFEENLRIVRYCVKYGKRVVFPSTSEVYGMCQDPDFDEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYGQQGLRFTLFRPFNWMGPRLD RLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAG FREVESRSFYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFLHEALREREAQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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