Pseudomonas chlororaphis YL-1, P637_RS0130115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 scaffold3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACACTGGCAACTGTCGCAGCCGGCACAACCTGCCAGCCATTGTGCCCTGGACCTTGAGCTGAACGGCACCCTGGGCGCCGGCGCCGAGTGTTTTTCCGCC TGGCTGGGCGATTCGGCCATCGGCTGGTTTCCCGAGCCGGACGGTATTGCCGTGACCGGCAAAGAGGGCTCGAAGATCATCTTTTTAAGTCGCCAGAAAG AAGGCTTATATCAAGGCACTTTGAAATCAGGCATAACGATTATATTGCAGCGAGCCCCCTGAACAATCGCGGCTGTATGCATCTTTAAATGTATCTGTAT GGATAAGCGTATAAGGCAGTGCCATATACGCGATGTCCTTCGTTCGATTAAAGACAACTAAATAACTAGAACTCCGTTTCGTCTGGCGGTAGAGTCCTTT CGCCTGTCCGCCACAATAATCCAATAATGTCCCGACTCAAGTACGGGCGGTTTATTTGTCCTGCGCCCCTGGCACGGGATATACAGCTCAGGAAAGACCA
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| DNA Sequence for Gene |
>P637_RS0130115
ATGAAGATGGCGAAGACCACTGCACCGCTGTTCAAGGCACTGGGCGATTACAAAGGCATTCTGATCAGCGTCGGGTGTTTCACCGCCCTGATCAACGTGC TGATGCTGGTCCCCTCGATCTACATGCTCCAGGTCTACGACCGGGTACTTTCCTCGCAGAACGAAACCACCCTGGCGATGCTGTCGCTGATGGTGGTCGG GTTCTTCGCGTTCATCGGCCTGCTGGAGGTGGTGCGCAGCTTCATCGTCATCCGCATCGGCAGCCAGCTGGAGCGGCGTTTCAACCTGCGGGTCTACCAG GCGGCGTTCGAGCGCAACCTGTTTCGCGGCGAAGGGCATGCCGGGCAGTCCCTGGGCGACCTGACCCATATCCGCCAGTTCGTCACGGGACCTGCGTTGT TCGCCTTCTTCGACGCGCCCTGGTTCCCCGTCTACCTGTTCGTGATCTTCCTGTTCAATACCTGGTTGGGGGTGTTCGCCACCGCCGGCGCGGTCTTGCT GATCGCCCTGGCATACCTCAACGAGGCGATGACCAAGAAGCCTTTGGGCGAGGCCAGCGGCTATTCGCAGAAGTCCACGCAACTGGCCACCAGCCACCTG CACAACGCCGAGACCATCCAGGCCATGGGCATGCTCGGCGCGCTGCGCAAGCGCTGGTTCGAGGTGCATTCGCGCTTTCTCGGCCTGCAGAACCAGGCCA GCGACACCGGCGCGGTCATCAGCTCGCTGAGCAAGACCCTGCGCCTGTGCCTGCAATCGCTGGTGCTGGGCCTGGGCGCCTTGCTGGTGATCAAGGGCGA CATGACCGCCGGCATGATGATCGCCGGCTCGATCCTGATGGGCCGGGTGCTGAGCCCGATCGACCAGTTGATCGCCGTGTGGAAGCAGTGGAGTTCCGCC AAGCTGGCCTACCAGCGCCTGGACTCCCTGTTGCAGGCCTTTCCACCGAGCGATACGGCGATGTCGTTGCCCGCGCCCAAGGGCCAGGTGAGTTTCGAGC AGGTCAGCGCCGGCCCGCCAGGCAAACGCATGGCGACCTTGCAGCAGGTCAGTTTCAACCTCGGGGCGGGGGAGGTGCTGGGCGTGCTCGGCGCTTCCGG TTCCGGCAAATCCACACTGGCCCGGGTGCTGGTGGGCGTATGGCCGACCCTGGCCGGCACGGTGCGCCTGGACGGCGCCGATATCCATCGCTGGAACCGC AACGAACTGGGGCCCTACATCGGTTACCTGCCCCAGGACATCGAGCTGTTTTCCGGGAGCATCGCCGAGAACATCGCGCGCTTTCAGGAGGCCGACCCGC AGAAGGTGGTGCAGGCCGCGCAACAGGCGGGCGTGCACGAACTGATCCTGCGCCTGCCCCAGGGCTACGACACCTTGCTGGGCGATGACGGCAGCGGCCT GTCCGGCGGCCAGAAGCAGCGCGTGGCCCTGGCCCGGGCGCTGTATGGCCAGCCGCGGCTGGTGGTGCTCGACGAACCGAACTCCAACCTCGACACCGTG GGCGAAAGCGCCCTGGCGTCCGCCATCGCGCAGATGAAGGCCCAGGGCACCAGCGTGATCCTGGTCACCCATCGTTCCTCGGCGCTGGCCCAGGCCGACA AGCTGCTGGTGCTCAACGAAGGGCGCCTGCAGGCCTTCGGCCCGAGCCAGGAAGTGCTCAAGGCGCTGTCCAGCGGTGCCCAGGCTCAGGCACAAAATCA ACACCAGGCCCAGCCCCAGGAACAGCAGCAGCGGGAAAAAACCTCGGCCCCGACGGCCCCGGGCGGCTTGAGCATGAGCCGCCAGTATCAGGCCCCGACA CGGAACCCAGGCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAGGACAGCGAAATGATGATCGAACAAGGTTATGCGCCGGAGCGTCCCGAGCGCGATGCGCGGTTTTTCGCGCGTATGGGTTGGGTGCTGGCGCTGGC CGGCGCCGGCAGCTTTTTTCTCTGGGCGGCCCTGGCGCCGTTGGACCAGGGCATCCCGGTGCAAGGCACGGTGGTGGTCTCGGGCAAGCGCAAGGCCGTG CAATCCATGAGCGGCGGCGTGGTCAGCCGGATCCTGGTGCGTGAAGGCGAGGCGGTGAAGCAGGGCCAGCCGCTGTTCCGCCTGGACCAGACCCAGGTCG AGGCCGATGTGCAGTCGCTGCAAGCGCAGTACCGCATGGCCTGGGCCAGCCTGGCACGCTGGCAGAGCGAGCGCGACAACCTCAAGCAGGTGAACTTTCC CGAGGCCCTGAGCGCCGATCCCGATCCACGCCTGGCCCTGGTCCTGGAAGGCCAGCGGCAACTGTTCAGCAGCCGGCGCGAGGCTTTCGCCCGCGAGCAG
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| Amino Acid Sequence |
>peptidase
MKMAKTTAPLFKALGDYKGILISVGCFTALINVLMLVPSIYMLQVYDRVLSSQNETTLAMLSLMVVGFFAFIGLLEVVRSFIVIRIGSQLERRFNLRVYQ AAFERNLFRGEGHAGQSLGDLTHIRQFVTGPALFAFFDAPWFPVYLFVIFLFNTWLGVFATAGAVLLIALAYLNEAMTKKPLGEASGYSQKSTQLATSHL HNAETIQAMGMLGALRKRWFEVHSRFLGLQNQASDTGAVISSLSKTLRLCLQSLVLGLGALLVIKGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWSSA KLAYQRLDSLLQAFPPSDTAMSLPAPKGQVSFEQVSAGPPGKRMATLQQVSFNLGAGEVLGVLGASGSGKSTLARVLVGVWPTLAGTVRLDGADIHRWNR NELGPYIGYLPQDIELFSGSIAENIARFQEADPQKVVQAAQQAGVHELILRLPQGYDTLLGDDGSGLSGGQKQRVALARALYGQPRLVVLDEPNSNLDTV GESALASAIAQMKAQGTSVILVTHRSSALAQADKLLVLNEGRLQAFGPSQEVLKALSSGAQAQAQNQHQAQPQEQQQREKTSAPTAPGGLSMSRQYQAPT RNPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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