Pseudomonas chlororaphis YL-1, P637_RS0124220
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 contig86, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAATAGCTTGGCTGGTAAGCGTCAGCATTGGTGCTGACCGGGGCTCGGGCCGGCTCGACCGGCTTGGGCGCTTCGGGCGCGGCCATCAGCATCGAGCTG CCCAGGCCGGTACTGGCGACCGTGACCACCGGGATCAAGGTCAGGGATTTGCGCAGAAACTCACGCCGCGGGTTGTCTTGATCGTGATCAGACATGGGGG TGCACCTCACACTAGGCATTCACGGGTTGGGCAGCCGCGTCATGGCGTGGCTTGTCGTTCTGGCGGCGCAACGGGTCGATCCCGAGGCCGGGGAAAGCAC AGTTCAGCAAATTTTGGTTACAAATGGTAGCAGGCTAAGCATTCGAATAAATCGTTTGCGTTGCAAAAAAGTCGCGATTGCCGAGAAAAAACCTCTATCG CAGCGACTTCACGTTTCTTTGACGAGCGCCTCACAGGGCGTTGACCGGTCCGGATGGAAGCTAGGCTCTCTCCACCCCATTTCCGGTCACGGCCTTCTGC
|
|
| DNA Sequence for Gene |
>P637_RS0124220
ATGCACAACTCTCGTATCCTTCCCGCTCTCTGCCTGTCCCTGCTGACGCTGCTCGCCTGGCCCCAGGCGCAGGCCGCCGAAACCGGCACGACCCGCCCGG CCCAGTGGGCCCAGCCCGTGGAAACCCACTACAACCTGTACCAGATGTCGCCGACGCTGTACCGCAGCGCCTTGCCGGACGGCGGCGCCGTGCCTTTGCT GGAAAAACTCAAGGTGGGCACGGTGATCAACTTCCTGCCGGAGTCCGATTCCAGCTGGCTGCAGGCCCCGGGAATCAAGCAGGTGCAATTGCCTTACCGG ACCAATCACGTGGATGACGCCGACGTGCTGGCGGCCTTGCGCGCGATCCAGAGCGCCGAAAGCGACGGCCCGGTGTTGATGCACTGCAAGCACGGCTCGG ACCGCACCGGCCTGATGTCGGCGATGTATCGAGTGGTGGTTCAGGGTTGGAGCAAGGAGGAGGCGCTGAATGAAATGACCGGAGGCGGGTTTGGTGACAG TTCCCACTTCAAGGACGGCATTCGCTACATGATGCAGGCCGATGTCGACAAATTGCGCACCGCCCTGGCCAATGGCGATTGCAGCACCAGCGTGTTCGCC ACCTGTTCGGTGAAGAGCTGGTTCGAGACGGTGAGCGTCAGCAAGCCAGCGAATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGCTGCGTGAAGCTGCAGAATTGAGCTTCGACCGCATCCCGGTAGGAGCCAAGCTTGCTGGCGATCAAAGCACCGCGGTGTACCTGATACACCGCTAT CGCGCGCAAGCTGCGCTCCTACAGGGGATTTGCAGTTACTTGGACTCGTCGGTCTTTTTCTTCAACTTGGGGTTGGGGAAAAACTGCACCGACTGGACCT TGGCATCCGGCACCTTGAGGGCCGTGGTGTTGACCCGCGTGCCCAGCTCCTTGGGCACCGACAGGCCCTGTTCATTCAGGGTGTCGGAATACCCGCAGGC CACGCACTCGCGATGGGGAACGTCGTCTTCGCTCCACATCATCAACTTGTCCTGCTCGCTGCACGCCGGGCAGACCGCCCCGGCGATAAAGCGTTTTTTC GTCTTCACTGGCCCCTCGCTCATGCCGCTGCGTCCTCGGTCAGGCCGCTATGGCGCAAGAGTGCGTCAATCGACGGTGCGCGTCCGCGGAAGTCGACGAA
|
|
| Amino Acid Sequence |
>protein tyrosine/serine phosphatase
MHNSRILPALCLSLLTLLAWPQAQAAETGTTRPAQWAQPVETHYNLYQMSPTLYRSALPDGGAVPLLEKLKVGTVINFLPESDSSWLQAPGIKQVQLPYR TNHVDDADVLAALRAIQSAESDGPVLMHCKHGSDRTGLMSAMYRVVVQGWSKEEALNEMTGGGFGDSSHFKDGIRYMMQADVDKLRTALANGDCSTSVFA TCSVKSWFETVSVSKPAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|