Pseudomonas chlororaphis YL-1, P637_RS0121655

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis YL-1 contig72, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTTTTCCTGGCAGTACATAGCCAGCCTCCCAGCCAAACGATAAGATTTGCCCTACTTCATCCTCAGCGCTCAAAAGTTATTCCCTCTAGTGCGAGCAAT GCATACCCCTGTTTCCAGCAGCGCCTTTTAAAGCACATATAGAGAGTTGATCCAACAAGCATTAAGGCAACAGTCGCGCTCCTATCTAGTTGTATCGGTA GTTAGTCTATTCCTCCTCTCGACTCGCCCACCACCCAATGCGCTGGCCTTCCTGGGTACCACAAAACGACCGAAGGCGATACAAATCGCTCCCCTGCTTA CCCGACCAGACAGACAATTCTCCTCAAGAAAATCCTCATAAGACAAAACTTTAAGAATCTTCTTATTGAAATCCCGCCAACCAACAAAGCATTAGCAGCC ATTCAAAGCCACAGACTAATCAACAGTTTAAGAATGGTCTTATTGTAACGACCGAAGTGAAGATACAAGATTGCACCTCCAACTTTAGCAGGTACATGAA
DNA Sequence for Gene
>P637_RS0121655
ATGTCCAAACTTCTCAAAAGCATCGTCTCCATGGCTATCGCTGGCGCAGTCAGCACTTCCGCTCTCGCGGCAGACGGCACCATCAACTTCACCGGCGATA TCGTCGCTGCATCCTGCAAAATCGCCCCCGGCACCGGTACTTCCGGTAGTAGTAGTGCCATCGATGTCAACCTCGGCAAGGTCAGCACCGACTCGCTCGG CGGCACTGCCGGAGGCAGCATCGTCGGTGGTAAGAGCATCAACCTGAACCTGGATTGCGGTGGCACCGCAGCAGGCCTGAAGTCCGTCAAGCTGCAATTC GACCCGAGCAGTGGCTCCGGCATTGACGGCGGGAACGTCTCGCTGCTGAAAATCGTCGGTGGTGCTGAGGCTGCAGAAGGTGTGGGTATCGGTCTTTACA ACAGCAGCAACAAGCTGGTGAACCTCGGCGCGAACGAAACCATCGATGGCGAGCTGACGCCAAACACCGTAGAAGGCAAAACCACATACACCGCCAAGCT GAACATGCGTGCAGGTTATGTGGCAAACGGCGAAGCGTTCAAAGCTGGTAAAGCAAACGGCACCCTGCCGTTTACCTTGAGCTACGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGCGCCAAAGGGAGGGGCCTGCGCCCCTCCCTCCGACCTGGAGCCGCTATGAAAACCCCACTATTGACACGTCTTGCACTCGCCAGTGCCATGACTCT CTTTGCGTCGATGGCCAGTGCCGGCATTACGCTGGATGGCACCCGCGTCGTCTTTGCTGCGCCAGCCAAGGAAACATCCGTCGTCGTCAGAAATCAGGAC TCGAACGACATCATGGTCCAGTCCTGGGTCGAGCCAGACAGCAGCGGGTCCGCGACCGACGTACCGTTCGCCATTACCCCTCCCCTCGTTCGCCTTGGAG GCAACAAGCAGCAAGTCCTGCGCATCCTCTATCAAGGCCAAGGGTTACCGACCGACAAGGAGTCCGTGTTCTGGCTCGCCGTGCAAGAGATTCCGCAAAA AGCCAAGGACCAGAACAGCCTGCAGATCGCCATACGCCAGCGCGTAAAACTGTTCTACCGCCCGGCCAACCTGCCGGACACCGCGGCCAATGCAGCCAAG
Amino Acid Sequence
>fimbrial protein
MSKLLKSIVSMAIAGAVSTSALAADGTINFTGDIVAASCKIAPGTGTSGSSSAIDVNLGKVSTDSLGGTAGGSIVGGKSINLNLDCGGTAAGLKSVKLQF DPSSGSGIDGGNVSLLKIVGGAEAAEGVGIGLYNSSNKLVNLGANETIDGELTPNTVEGKTTYTAKLNMRAGYVANGEAFKAGKANGTLPFTLSYE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site