Pseudomonas chlororaphis YL-1, P637_RS0120260 (hscA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis YL-1 contig66, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGTTACCGTGAGTTGGCGCGTGCCGTTCATCCGGACCGCTTCGCTGACGCTTCCGAGCGTGAGCAGCGGCTGGCGCTGGAGCAATCCGCCAGCCTCAA CGAGGCCTACCAGACCCTCAAGAGCCCTCCCAGGCGCGCGCGATACCTGCTCGCCATGGGCGGCCATGAGCTGCCGCTGGAGGTCACGGTGCACGATCCG GAGTTCCTTCTGCAGCAGATGCAGTGGCGCGAAGAGCTCGAGGATCTGCAGGACGAGGCCGACCTGGCCGGTATTGCAGCCTTCAAGCGCCGCCTGAAAG TGGCCCAGGATGAATTGAACGAAAGCTTCGCAGCCTGTTGGGATGATGCTGCGCAACGCGAACAGGCCGAGCGCCTGATGCGGCGCATGCAGTTCCTCGA CAAGCTCACCTACGAAGTGCGCCAGTTAGAAGAGCGCCTCGACGATTAACCCAGTGCCGCTCCGGTCGCACGCCTGATATTCAGATAAGTCCAGATAAAC
DNA Sequence for Gene
>P637_RS0120260 |hscA
ATGGCCCTACTGCAGATCGCCGAACCCGGCCAAAGTCCTCAACCGCACCAGCGTCGCCTGGCTGTGGGGATCGACTTGGGTACTACCAATTCGCTGGTCG CTGCCTTGCGCAGTGGTCTTTCCGAGCCGCTGGCCGACGCCAACGGGCAGGTCATCCTGCCGTCTGCCGTGCGTTATCACGCCGACCATGTCGAGGTGGG CGAGTCCGCCAGGCTGGCGGCGTCTGCCGACCCCTTGAACACTGTGCTGTCGGTCAAGCGCCTGATGGGGCGTGGTCTGTCCGACGTCAAGCAACTGGGC GAACAGCTGCCGTACCGCTTCGTCGACGGCGAGTCGCACATGCCGTTCATCGACACCATCCAGGGCCCGAAAAGCCCGGTGGAAGTCTCCGCCGACATCC TCAAGGTCTTGCGCCAGCGCGCCGAGTCGACCCTGGGCGGTGAGCTGGTGGGGGCGGTGATCACCGTTCCGGCCTATTTCGACGATGCGCAGCGTCAAGC GACCAAGGATGCGGCCAAGCTGGCCGGTCTCAACGTGTTGCGTCTGCTCAACGAGCCGACCGCGGCGGCCGTGGCCTATGGTCTGGATCAACACGCCGAA GGCGTGGTGGCCATTTATGACCTGGGTGGCGGGACCTTCGATATTTCCATTCTGCGCCTGACCGGCGGTGTCTTCGAAGTGCTGGCCACTGGTGGCGACA GCGCCCTGGGCGGCGACGATTTCGATCATGCAATCGCTGGCTGGATCATCGAGAACGCCGGCCTGTCCGCCGATCTCGATCCGGGTAAGCAGCGCAATCT GCTGCAAATCGCCTGCGCCGCCAAGGAAGCGCTCACCAATGCCCCGTCGGTCGACGTGACCTATGGCGCCTGGTCGGCACCGCTGACCCGCGAAGCCTTC GATGCCCTGATCGAGCCGATGGTGGCGCGCAGCCTCAAGGCTTGCCGTCGCGCCGTGCGTGATTCCAATGTCGAGCTGGAAGAGGTCCAGGCAGTGGTCA TGGTCGGCGGTTCGACTCGTGTTCCGCGGGTTCGCGAAGCCGTCGCCGAAATGTTCGGTCGCCAGCCGCTGACCGAGATCGACCCGGACCAGGTGGTGGC CATTGGTGCTGCGATCCAGGCCGATACCCTGGCCGGCAACAAGCGCGATGGCGGCGAACTGCTGCTGCTTGATGTGATTCCACTGTCCCTGGGGCTGGAA ACCATGGGCGGGCTGATGGAGAAGGTGATTCCGCGTAACACCACTATCCCCGTTGCCCGTGCCCAGGACTTCACCACTTACAAAGATGGCCAGTCGGCCA TGATGATTCATGTATTGCAGGGCGAGCGCGAGCTGATCAGCGACTGCCGTTCCCTGGCGCGCTTCGAGTTGCGCGGCATTCCGGCCATGGTCGCTGGTGC GGCGAAGATCCGCGTGACTTTCCAGGTCGATGCCGATGGTCTGCTGAGCGTGTCCGCCCGCGAACTGGGCTCGGGCGTCGAAGCCAGCATCCAGGTCAAG CCATCCTACGGCCTGACCGACGGCGAAATCGCCAGGATGCTCAAGGACTCCTTCCAGTACGCCAGCGACGACAAGGTCGCCCGCGTGCTGCGCGAGCAGC AGGTCGATGCCCAGCGCCTGATCGAGGCGGTGCAGGGCGCTCTGGAGGCAGACGGCGAGCGTCTGCTGGATGCCGAAGAGCGCATGGTCATCGAGTTGCA AATGCAGGAATTGAGTGAATTGATGCGTGGCACCGATGGTTACGCCATCGAGCAGCAGACCAAGCGTCTGTCGCAAGTGACCGATGCTTTTGCTGCCCGC CGGCTGGACTCGACGGTGAAAGCCGCTCTGGCGGGGCGCAATCTGAATGAAATCGAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGATGCCGCAGATCATTTTTCTGCCACACGCCGTGTTTTGCCCGGATGGCCTGGTTGTAGAGGCTGCACCGGGTACCTCGATTCTCGAAGTGGCCCATG ACAACCACATCGAGATCGAGAGCGCCTGCGGCGGCGTCTGCGCCTGCACCACCTGCCACTGCATCATTCGCGAGGGTTTCGACTCGCTGAATGAAGCCGA CGAGCTGGAAGAAGACCTGCTGGACAAGGCCTGGGGCCTGGAGGCGCAATCGCGTCTATCCTGTCAGGCGATCGTCGGCGAGGAAGACCTGACCGTCGAA ATTCCGAAGTACTCGCTCAACCATGCGGCCGAAGCGCCGCACTGATTCAAGGAATCATCATGAGTCTGAAATGGGTTGATGTGCTGGAAATCGCGATCCA GCTGGCTGAGTCCAAGCCGGATGTGGATCCGCGGTACGTAAACTTTGTCGATCTGCACCAATGGGTTCTGGCACTGCCGGAATTCAGCGACGATCCGGCT
Amino Acid Sequence
>chaperone protein HscA
MALLQIAEPGQSPQPHQRRLAVGIDLGTTNSLVAALRSGLSEPLADANGQVILPSAVRYHADHVEVGESARLAASADPLNTVLSVKRLMGRGLSDVKQLG EQLPYRFVDGESHMPFIDTIQGPKSPVEVSADILKVLRQRAESTLGGELVGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAVAYGLDQHAE GVVAIYDLGGGTFDISILRLTGGVFEVLATGGDSALGGDDFDHAIAGWIIENAGLSADLDPGKQRNLLQIACAAKEALTNAPSVDVTYGAWSAPLTREAF DALIEPMVARSLKACRRAVRDSNVELEEVQAVVMVGGSTRVPRVREAVAEMFGRQPLTEIDPDQVVAIGAAIQADTLAGNKRDGGELLLLDVIPLSLGLE TMGGLMEKVIPRNTTIPVARAQDFTTYKDGQSAMMIHVLQGERELISDCRSLARFELRGIPAMVAGAAKIRVTFQVDADGLLSVSARELGSGVEASIQVK PSYGLTDGEIARMLKDSFQYASDDKVARVLREQQVDAQRLIEAVQGALEADGERLLDAEERMVIELQMQELSELMRGTDGYAIEQQTKRLSQVTDAFAAR RLDSTVKAALAGRNLNEIEE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site