Pseudomonas chlororaphis YL-1, P637_RS0119365 (argJ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 contig66, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCACCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAATACAAGCGCGAGTCCTTCACCCTGTTCTCCGAGCTGCTGGATTCCATCAAGCGCGATTC GATCCGCGTGCTGTCGCACGTTCAGGTTCGTCGCGAGGATCCGATCGAGGAAGAGGCGCGCCTGCGCCAGGAAGCCGAGGCACTGGCTCAGCGCATGCAG TTCGAGCACGCCGAAGCTCCGGGCCTTGAGCAGCCGGAAGCGCTGGAAGAGGGCGTCGATGTCGACGTGGCCCTGGCCTCCGCTCCGGTACGCAATGAGC AGAAACTGGGCCGCAACGAACTGTGCTACTGCGGTTCGGGCAAGAAGTACAAACACTGTCACGGCCAGATCAACTAAGATTTTCGCCAGACACTGAAATA CCCGCGCCGCGACCGGCATCAGCCGTCGCGGCGTTTTTCCATTCGCCGCACTGCCTTTTGCGATGGCAGTGCACACATCAGGTTAAAGAGGAGCGCATTC
|
|
| DNA Sequence for Gene |
>P637_RS0119365
|argJ
ATGGCTGTTGGTCTTGGTCCTTTGCCAACGTTGCACCCGGTTGCCGGTTTTGAACTCGGTATCGCTTCGGCGGGCATCAAGCGCCCGGGGCGCAAGGATG TTGTGGTCATGCGCTGTGCCGAAGGTTCCACGGTGGCCGGTGTGTTCACCTTGAACGCGTTCTGCGCCGCCCCGGTGATCCTGGCCAAGCAGCGTGTGCA AGGCCCTGTGCGTTACCTGCTGACCAACACCGGCAACGCCAACGCCGGTACCGGCGAGCCAGGCCTGGCCGCCGCGACCCGCACCTGCGCCAAGCTGGCC GAACTGACGGGCGTCGACGCCAGCGCCGTACTGCCGTATTCCACCGGGGTCATCGGCGAGCCACTGCCGGTCGAGAAGATCGAAGGCGCGCTGCAGGCCG CGCTGGACGACCTGTCCGTGGACAACTGGGCCGCCGCGGCCACTGGCATCATGACCACCGACACTCTGCCCAAGGGGGCCAGCCGCCAGTTCCAGCACGA CGGCGTGACCATCACCGTCACTGGTATCAGCAAGGGCGCGGGCATGATTCGCCCGAACATGGCGACTATGCTCGGCTACATCGCCACTGACGCCAAAGTC TCCCGTGAAGTGCTGCAGAACCTGCTGCTGGACGGCGCCAACAAGTCGTTCAACCGCATCACCATCGACGGCGATACCTCCACCAACGACTGCTGCATGC TGATCGCCACTGGCCAGGCAGGCTTGCCGGAAATCACCGAAGCCAGCGGCCCGCTGTTCGCCGCGCTGAAGCAGGCGGTATTCGAAGTGTGCATGGAAGT GGCCCAGGCCATCGTGCGTGACGGCGAAGGGGCGACCAAGTTCGTCACGGTCGAAGTCAACGGCGGCGGCAATCACCAGGAGTGCCTGGATGTCGGCTAC ACCGTGGCCCACTCGCCGTTGATCAAGACCGCGCTGTTCGCGTCCGACCCGAACTGGGGGCGTATCCTGGCCGCTGTCGGTCGTGCCGGCGTGCCGGACC TGGATGTGAGCAAGATCGACGTTTTCCTCGGCGAAGTCTGTATCGCCAGCCGTGGCGCGCGTGCCGCCAGCTACACCGAAGCCCAGGGCGCGGCAGTAAT GCAGCAGGAAGAAATCACCATCCGCATCGAGCTGGGACGCGGTGATTGCAGCGAAACCATCTGGACCACCGACCTGTCCCACGAGTACGTGAAAATCAAC GCGGAATACCGTACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TACACCGCTACTCGCTTCTACATGGACGCGACGCATCACGTGTAGGAGCGAGCCTGCTAGCGATGGAGGCCCATGGCCTCCATCTCCTCTGAAAGGTGCC CGACATGAATCTTCACCTGATCATCGGCGACAAGCTCTATTCCTCCTGGTCGCTGCGCGCCGCCCTGGCGCTTGAGCTGGCCGGCGCGACTTACACCGAA GAACTGATCAAGCTGAACCAGCCCGATACCCGCGAGCGGATTCTCAAGCATTCGCCGACCGGCAAAGTCCCGTTGCTGAAGACCGAACACGGCACCATCG CCGATTCCCTGGCGATTGCCGAATACCTGGTCGAGCGTTTCCCCGAAGCCGAGCTCTGGCCGCGCGATGTGGCCGCCCGTGCCCAGGCCCGCTCGGCCTG TGCGCAGATGCACAGCGGTTTCTTCGGCCTGCGCGGCAACCTGCCGTTCGACCTGAGCCGCGATGCTGCGCTGTCGCCCATGCCACCCGAAGCCCAGGCC
|
|
| Amino Acid Sequence |
>ornithine acetyltransferase
MAVGLGPLPTLHPVAGFELGIASAGIKRPGRKDVVVMRCAEGSTVAGVFTLNAFCAAPVILAKQRVQGPVRYLLTNTGNANAGTGEPGLAAATRTCAKLA ELTGVDASAVLPYSTGVIGEPLPVEKIEGALQAALDDLSVDNWAAAATGIMTTDTLPKGASRQFQHDGVTITVTGISKGAGMIRPNMATMLGYIATDAKV SREVLQNLLLDGANKSFNRITIDGDTSTNDCCMLIATGQAGLPEITEASGPLFAALKQAVFEVCMEVAQAIVRDGEGATKFVTVEVNGGGNHQECLDVGY TVAHSPLIKTALFASDPNWGRILAAVGRAGVPDLDVSKIDVFLGEVCIASRGARAASYTEAQGAAVMQQEEITIRIELGRGDCSETIWTTDLSHEYVKIN AEYRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|