Pseudomonas chlororaphis YL-1, P637_RS0119345
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 contig66, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCACCGCGCCCTTCTGGCTCGACGACCTGAGCGCCAGCGGCATTCCCCATGAATGGAGCGCGGACATCCTGACCCGCCTCTGGCGCAAGCTGGCGCTCAA CTGCGCGATCAATCCCCTGACGGTCCTGCATGACTGCCGCAACGGTGGCCTGCTGCAGCATCATTGCGAAGTGGCGATGCTGTGCGTCGAGCTGAGCGAA CTGCTGGAACGCTGCGGCCAGCCCGCCGCGGCCGAGAACCTGCAGCAGGAGGTGGAGCGGGTGATCCAGGCCACCGCCGCCAACTATTCCTCCATGTACC AGGATGTCGCCAGCCGGCGCAGGACCGAAATCAGCTACTTATTGGGGCATGCCTGTGACGTTGCCACCAGGCACCAGCTGCACCTGCCCAACCTCAGCCG CCTGCGCCGGCTATTGGTGGAACACCTGCAACAGCGCGGATTGCCCAGCGACTGAGCAGCGGCTACGCTGCCCACGTGTTCCTCTCTAGCGACGTCCCCG
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| DNA Sequence for Gene |
>P637_RS0119345
ATGCCATTGCGCCAGCGCCTTGAAAACCTGCCGGTCGGCCAAAAACTGCTGGCCGCCTTGCTCGTCCTGCTGATTACCGTACTGCTGGTCGCCAACCTGA CCTTCATCAGCGCCGCCTACTGGATCTCCCAGGAAAGCATGGCGCCGCAAGCCTTGCAGACCATCGGAAGGCTGGTATCCAACCCGACCCTGGCCGCGCA GGCGCTGGATTCGCCACAAAACGCCGAGAAGCTGCTCAACGAACTCAACAGCTACTCCCCCCTGCGCGCCGCAGCGATCTATGACGGCAAAGGCACGCGC CTGGCCCAACTGCAACATGGCGAACGCCTGAGCCTGCCGGAGCGCTATCGGCATATCGAAGCCTGGCAACTGACCGAATTTCGCAGCAACCAGATCATCA CCCTGCCCCGCGCCGGCCAGCCCCCCGGCCATCTGTTGCTGGTGGCCAGCAGTGAACTGCCGATGGCCTTCTACACCGGCACCCTGACCGCGAGCCTGGG TATCCTGATCTTCAGTGTGCTGCTGTGGTTGATCATTGCCCGGCAGATCAAGCGGCTGATCACCCAACCCATCCACCAGCTGGAAGAACTGTCCCGACAA GTGACACGCGAGGAAAACTATTCCCTGCGCGCCGCCCGCGGCAACCGCGATGAGATCGGCAGCCTGGCCGATGCCTTCAACACCATGCTGTCGCGCATCG AGGCGCGAGAGCAGCAACTCAAGCGCGCCCGCGACGACTCCCAGGCGGCCTATGACCAGGCCCAGGGCCTGGCCGAAGAAACCCGCCACACCAACCGCAA GCTGGAACTGGAAGTCCAGGTGCGCAGCAAGATCGAAAAGAAACTCACCGGCTTCCAGAACTACCTCAACAGCATCATCGACTCGATGCCCTCGGCCCTG ATCGCCCTGGACGAGCAGCTCTATGTCACCCAATGGAACCAGGAAGCCAGCGCCCTCTCCGGCACGCGCCTGGACGAAGCGCTGAACCAGCCGATCTTCC TCGCCTTCGAACCGCTCAAGCCGTTCCTGCCGCAACTCAAGGAAACCGTAGAGCAGCATACGGTCACCAAGGTCGAGCGGGTCACCTGGGTCAAGGACGA CGAGGCCCGGCATTACGCCCTTACCTTCTACCCGCTGATGGGCGGTGCCGGGCGCGGCGTGGTGATCCGGATCGACGACATCACCCAGCGCCTGTCCCTG GAAGAAATGATGGTGCAGTCGGAAAAAATGCTCTCCGTGGGAGGGTTGGCCGCCGGCATGGCCCATGAAATCAACAACCCGCTGGGAGCGATCCTGCACA ACGTGCAGAACATTCGTCGGCGCCTGTCACCCGAGCTGCCGAAGAACCTGGAGCATGCCGAGCAGCTGGGCATCGAACTGGAAACCGTCAACCATTACCT GCAGAGCCGCGAAGTGCCGCAACTGCTCGACGGCATCCAGCAGGCCGGCGCCCGGGCGGCGAAGATCGTGACCCATATGCTCAGCTTCAGCCGGCGCAGC AACCGGCAGATGGCGCCTTGTGACCTGCCGGCACTGATCGACCAGGCCGTGGAAATTGCCGGCAACGACTTCGACCTGGCCATAGGCTTCGACTTCAAGG GCCAGGCCATCATCCGCCAGTTCGACCCGCAACTGGGGCCGGTGCCCGGTACCGCCAACGAACTGGAACAGGTCCTGCTCAACCTGCTGAAAAACGCCGC CCAGGCCATTCACCAGCGGGTAGACGACAGCGAACCCGGGCGCATTATCCTGCGTACTCGGCTGAACCCGCCCTGGGCGGAAATCCAGGTCGAGGACAAC GGCATCGGCATGAGCGAAAACGTGCGCAAACGGACCTTCGAGCCGTTCTTCACCACCAAGGAAATCGGCCAGGGCACCGGCCTTGGGCTGTCGGTTTCGT ACTTCATCATCACCAACAATCACAAAGGCCAGATGGAAGTGCAGTCGACGCAGGGCCAGGGCACATGCTTCACCTTGCGTTTGCCACTGGCGGGCAGTCA GCCGCCACCACTGGAACATCCCCCACTGGAGAGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCATGGGCTTTCGCTTGTCGAAGATTTACACCCGCACCGGCGACAAAGGCGAAACCGGGCTGGGTGACGGGCGCCGGGTTCCCAAGGACCATCCGCGGGT CGAAGCCATCGGCGAAGTCGATACGCTGAACAGCCAGCTCGGGTTGCTCCTGGCCGGGCTGATTGAACAGCGCACCGAGCATCCGGGTTTGCAGGAATTG ATCGATGTCCTGGCGCCCTGCCAGCACCGCCTCTTCGACCTGGGTGGTGAGTTGGCCATGCCGGTGTATCAGGCACTGAATGCTACGGAAGTCGAACGCC TGGAAGCAGCTATCGATACCTGGAACGAAGAGTTGGGGCCGCTGGAAAATTTCATTTTGCCGGGCGGTTCGGCCTTGATCGCCCAGGCTCATGTTTGCCG CAGCCTGGCGCGCAGTGCCGAGCGACGTTGCCAGCACTTGAATGCCGTGGAACCGCTGGTGGGGGTCGGCCTGGCCTACATCAATCGCCTGTCCGACTTG
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| Amino Acid Sequence |
>histidine kinase
MPLRQRLENLPVGQKLLAALLVLLITVLLVANLTFISAAYWISQESMAPQALQTIGRLVSNPTLAAQALDSPQNAEKLLNELNSYSPLRAAAIYDGKGTR LAQLQHGERLSLPERYRHIEAWQLTEFRSNQIITLPRAGQPPGHLLLVASSELPMAFYTGTLTASLGILIFSVLLWLIIARQIKRLITQPIHQLEELSRQ VTREENYSLRAARGNRDEIGSLADAFNTMLSRIEAREQQLKRARDDSQAAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFEPLKPFLPQLKETVEQHTVTKVERVTWVKDDEARHYALTFYPLMGGAGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELPKNLEHAEQLGIELETVNHYLQSREVPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQMAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPQLGPVPGTANELEQVLLNLLKNAAQAIHQRVDDSEPGRIILRTRLNPPWAEIQVEDN GIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSTQGQGTCFTLRLPLAGSQPPPLEHPPLER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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