Pseudomonas chlororaphis YL-1, P637_RS0119075
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 contig66, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACTGGACTTCAACAACGGGATTACCGTCAACGGCATCTCGGTGCCAGCCCTGGTTGTGCGTCGCACCGACACCAGCATCTCCCTGGCCGACGGTGAGA GCTTCGTGATCAGCGGCCTGATCAGCACCACCAATACCACGGCCGTGAGCAAGTTCCCCGGCCTGGGAGAGATTCCGATCCTGGGCGCATTCTTCCGTGA TTCTTCGATCAGGCGCGAAGAGAAGGAACTGCTGATGATCGTCACCCCGCATCTGGTGCAACCGCTGGCGGTCAACGCCAAGCTGCCGGTACTGCCTGGC GAGCCACTGCGCAACTACGACCCGAACTGGTTCCGTCTGTACTTCCTGGAAAACGGCAATTATGACCAGGCCGCCAGCGGGCTTTCGCAATGAACCAGGG TTCTGGCTCGTCGCTGGCCACGCTCAGGCTCGATGACACCGGACTCGGCAAGTCCGGTGTTGGCCATTCCTCGACAATCGGATTGTTCCAGGAGCGAAAA
|
|
| DNA Sequence for Gene |
>P637_RS0119075
ATGAAAGTAGTCATTGCTGCGTTGGGGCTGCTCATGCTCAGCGGCTGCGCCACGAACGGCAGCAGTGCCTGGTCGAAGCAGGCATGCAGCAAACTGGATT CGGATCAGGAACTGTCGCTGAGCCTGGCCGACGACATGATCGGCGAAGGCAAGCTGCACGCCGGCCTGGCCAATCTGCAACGCCTGCCGGAAGACCTGCC GCAGGTCCGCATGCGCAAGGCCAAGGTCTATCGCCAGCTCGGCCAGAGCGAGGCCGAGCCGCTGTACCGCAGCCTGCTCAGCACCTGCCTGGCCGCCGAA GGCGAGCATGGCCTGGGTCAACTGGCAGCGTCACGCCACGATAACGCTCTGGCCCTGGAACATCTGAAACGCGCGGCGCGCCTGTCCCCCACCGACGAGA AGATCCGCAACGATCTGGGGGTGGTCTACCTCAACCAGGGGGATACCAGGCAAGCCCGCTTTGAGTTCCTCACGGCCATGGAGCTGAAACAGGACGATCA GTTGGCAACCCTCAACCTGGTGACCTTGCTGATTTATCAAGGCAACTGGAAACAGGCCTCGGACCTGGTCAATCGTGCCGGCCTGAAGCCCGAACAAGTC ACCAACGCCAAGGAGCGGGCCGAAAAACTCAGGAACGCGGTGAAGAAGTCAGCTAACGGTCAGGCAGTCAGTGCTACGGATTCGTCGCCATCAAGTGTCA ATCAACCAATAACGCAGAGGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGATGAAATACCAAACGCTCAGCTGCCTGGGACTCTTGCTTCTTCCGCTGGTGACCCAGGCTATCGAACCCGGCCCGGCCTCCCTGTCACAACAGCCGAC CGAAACCTGGCTGCTGCTGCAGAGTCGAAACCAGGTCAAGTCGCCCATTCCTCAGAACGCCTCGCCCAGCGAACGGGAACTGACCCTGCAGCGCTGGCTG GACAACTACAAACACCCGATCCCCGAGTACTACAAGGAGTACGTAGGTTCGGGTAGTTCGGGTGGTTCAAAGTGACAATGAATCGCGATGGCGTTCAGTT CAGAGGGGGCAATGCCATCCATGCCGATGGCCCTTGCCCCTCCCCTCTTTCATAACTTCCCGAATACTTTGAAGACGCCGATGATCGCCGGTCCTATGGC GACCAGAAAGAAGCTTGGCCACAGGCAGAAGATCAGCGGAAACACCAGTTTGGTGCCGATTTTCGCGGCTTTCTCTTCGGCCTGCTGAGTGCGCCGGTCA
|
|
| Amino Acid Sequence |
>hypothetical protein
MKVVIAALGLLMLSGCATNGSSAWSKQACSKLDSDQELSLSLADDMIGEGKLHAGLANLQRLPEDLPQVRMRKAKVYRQLGQSEAEPLYRSLLSTCLAAE GEHGLGQLAASRHDNALALEHLKRAARLSPTDEKIRNDLGVVYLNQGDTRQARFEFLTAMELKQDDQLATLNLVTLLIYQGNWKQASDLVNRAGLKPEQV TNAKERAEKLRNAVKKSANGQAVSATDSSPSSVNQPITQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|