Pseudomonas chlororaphis YL-1, P637_RS0117145
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 contig62, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGAAGAAAACGGCAAGGGTTTGCCGAATTCGGATCTACGGGGAGATCAAGGAAAGGACGAAGACGAAGACCGTTCGTGAGGTTTTATTGAACGATCG CGCTCTTCAGGCACTCGATAAAGCTAAGCCATTAACCATGGCTCACTCGGATTACGTGTTTGCGCCAAGTGGCGCTGGGGATAGGTCAGAGCTGTACGTG AAGTCAGAGACTGGCGCTAAGCGCTATTGGGTAAGCGCGATGCGAAAGCTTGGGATCAGGCAACGTCGAATGTATGACACGCGCCACACCTACGCAACGA TGTGCCTGATGTCGGGCATGAACCCTGCGTTCATCGCCGCACAGCGTACAGGTCCTGCTTTCAACCTACGCCAAGTGGATCAACTCGCCGAGTGATTGGG CTGAATTGGAGAAACTGAATTTTGCTGAAACAGGTACAAATTTGGTACACGAAAAACTCCAATAGCGTCACACACTAAGAAACACAAGGGTTTTAGTCTT
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| DNA Sequence for Gene |
>P637_RS0117145
ATGTGCGGATTAGCTGGAGAACTACGTTTTGATCATCAACCCGCCGACCTGGCAGCGGTTGAACGAATCACCCACCACCTCACCCCTCGTGGCCCCGATG CCTGGGGCTTCCATAGCCAGGGCCCGATAGCCCTGGGCCACCGACGCCTGAAAATCATGGACCTGTCGGACGGCTCGGCCCAGCCGATGATCGACAACCA ACTGGGCCTGTCCCTGGCCTTCAACGGCGCGATCTACAACTTCCCCGAACTGCGCGCCGAGCTGGAAAGCCTGGGCTACGCCTTTTACTCCGGCGGCGAC ACCGAGGTGTTGCTCAAGGGTTATCACGCCTGGGGCGCCGAGCTGCTGCCGCGGCTCAATGGCATGTTCGCCTTCGCCATCTGGGAACGCGACGCCAAGC GCCTGTTCATCGCCCGCGACCGCCTGGGCGTCAAGCCGCTGTACCTGTCGCGCACCGGCCAGCGCCTGCGTTTCGCCTCGGCCTTGCCGGCGCTGCTCAA GGGTGGCGACATCAACCCACTGCTCGACCCGGTGGCGCTCAACCATTACCTGAACTTCCATGCCGTGGTGCCCGCGCCGCGCACCCTGCTGGCGGGCATC GAGAAACTGCCGCCGGCCACCTGGATGCGCATCGAAGCCGACGGCCGCACCGAGCAGCAAACCTGGTGGACCCTGCCCTACGGCCCGCGCGCCGATGAAA CCGGGCTGAGCCTGGAAGACTGGCGCGACCGCGTGCTCGACAGCACTCGCGAAGCCGTGGCGATCCGCCAACGGGCAGCGGTGGATGTCGGCGTGCTGCT GTCCGGCGGCGTCGATTCGAGCCTGCTGGTCGGCCTGCTGCGCGAAGTGGGTGTGGATAACCTGTCGACCTTCTCCATCGGCTTCCAGGATGCCGGGGGC GAACGCGGCGACGAGTTCCAGTATTCGGACCTGATCGCCCAGCACTACGGCACCGATCACCATCAGTTGCGCATCGACGAGCGCGAGATCATCGAACAGC TGCCGGCGGCGTTCCGTGCCATGAGCGAACCCATGGTCAGCCACGATTGCATCGCCTTCTACCTGCTGTCCCGGGAAGTCGCCAAGCATTGCAAGGTGGT GCAGAGCGGCCAGGGCGCCGACGAGTTGTTCGCCGGTTATCACTGGTACCCGCAGGTGGATGGCGCCAGCGATCCTTACGCGGCCTACCGCGAGGCGTTC TTCGACCGCAGCTACGACGACTACGCGGCCACCGTGCAACCGCAGTGGCTGACCGCCAACGACGCCGCCGGCGATTTCGTCCGCGAGCATTTCGCCCAGC CCGGCGCCACCGCGCCTGTGGATAAGGCCCTGCGCCTGGACAGCACGGTGATGCTGGTCGACGACCCGGTCAAGCGTGTGGATAACATGACCATGGCCTG GGGCCTGGAGGCGCGCACGCCGTTCCTCGACTACCGGCTGGTGGAGCTGTCAGCGCGAGTACCGGGCAAATTCAAACTGCCCGATGGCGGCAAGCAGGTG CTCAAGGAAGCCGCGCGCCTGGTGATCCCCAGCGCAGTGATCGACCGCAAGAAAGGCTACTTCCCGGTGCCCGGCCTCAAGCACCTGCAGGGCGACACCC TGGACTGGGTGCGTGAGCTGCTGCTCGACCCAAGCCAGGACCGTGGCCTGTTCAACCCGGCGATGCTCGACCGCCTGCTGACCGACCCACAAGGCCAGCT GACGCCGTTACGCGGCTCCAAGCTGTGGCAACTGGCCGCGCTGAACCTGTGGCTCAGCGAACAAGGAATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCATGAAACCCCACGCCACGGCTTACAGCCAACGCTTGCTGCGCGGTCAGGCGCCCTCCTACGAGCGTCTGCAGGCGCGTTTCGCCGAAGACCGCAGCG CCCTCGGCACCGCCCCCATCGCCGTGCACTGCGGCTGGGGCCGGCTGCTGATCGGCCATACCTTTCCCGACCCGACGAGCCTGGCCGAGGAGCTGCTCAA CGAACACCCCGGCGAACGCGACATCGCCTTGTATGTCGCCGCGCCGCAGCAGATTCTCGGCCTGGAGCCGACCCAGTTGTTCCTCGACCCGTCGGACACC CTGCGCCTGTGGTTCAGCGACTACCGCCAGGCCACCCGGGTGTTTCGTGGTTTCCGCATCCGCCGGGCGCAGAGCGCGGCGGACTGGCAGGCCATCAACC AGCTCTACGTGGCCCGCAACATGCTGCCGGTCGACCCGAGCCTGCTGACCCCGCGCCATGCCGGCGGGCCGGCGTACTGGTTGGCCGAAGACGAAGACAG
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| Amino Acid Sequence |
>asparagine synthase
MCGLAGELRFDHQPADLAAVERITHHLTPRGPDAWGFHSQGPIALGHRRLKIMDLSDGSAQPMIDNQLGLSLAFNGAIYNFPELRAELESLGYAFYSGGD TEVLLKGYHAWGAELLPRLNGMFAFAIWERDAKRLFIARDRLGVKPLYLSRTGQRLRFASALPALLKGGDINPLLDPVALNHYLNFHAVVPAPRTLLAGI EKLPPATWMRIEADGRTEQQTWWTLPYGPRADETGLSLEDWRDRVLDSTREAVAIRQRAAVDVGVLLSGGVDSSLLVGLLREVGVDNLSTFSIGFQDAGG ERGDEFQYSDLIAQHYGTDHHQLRIDEREIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVAKHCKVVQSGQGADELFAGYHWYPQVDGASDPYAAYREAF FDRSYDDYAATVQPQWLTANDAAGDFVREHFAQPGATAPVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRLVELSARVPGKFKLPDGGKQV LKEAARLVIPSAVIDRKKGYFPVPGLKHLQGDTLDWVRELLLDPSQDRGLFNPAMLDRLLTDPQGQLTPLRGSKLWQLAALNLWLSEQGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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