Pseudomonas chlororaphis YL-1, P637_RS0116630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 492 606 2.2E-21
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 412 422 2.7E-15
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 492 606 5.58842E-33
CDD cd00130 PAS IPR000014 PAS domain 113 215 1.6504E-4
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 589 712 4.32E-16
Pfam PF08448 PAS fold IPR013656 PAS fold-4 110 220 8.2E-14
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 649 705 2.61795E-5
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 613 724 4.6E-12
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 293 470 1.09E-39
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 429 447 2.7E-15
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 453 466 2.7E-15
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 90 215 8.2E-14
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 353 467 4.1E-25
Gene3D G3DSA:1.10.287.130 - - - 228 305 1.1E-17
PANTHER PTHR43047 TWO-COMPONENT HISTIDINE PROTEIN KINASE - - 95 611 1.4E-95
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 238 304 2.6E-12
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 661 713 8.7E-8
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 221 305 6.28E-16
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 352 469 2.9E-31
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 357 467 9.98611E-42
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 238 304 2.1E-15
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 237 300 2.72729E-11
Gene3D G3DSA:3.40.50.2300 - - - 484 611 3.4E-29
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 394 408 2.7E-15
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 489 609 1.57E-29
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 306 472 8.1E-41
Coils Coil Coil - - 673 720 -
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 105 221 9.4E-6
Gene3D G3DSA:3.30.450.20 PAS domain - - 88 227 2.4E-17
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 490 606 4.9E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.