Pseudomonas chlororaphis YL-1, P637_RS0108220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis YL-1 contig34, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCCTCGGCGTTGTCCCAGTCGGCGATCAGGCGCCGCGCCAGGGGCACCAGGGCCTCGCCTTCCGGGGTCAGGGCGACGTTGCGCGTGTTGCGGCTGAAC AGCCGCCCACCCAGGCCGTCCTCCAGGGCCTTGATGGTCAGGCTCAGGGCCGACTGCGACAGGTGCAGGCGCTCGCAGGCCACGGCGAAACTCAGGCTCT GGGCCACGGCCAGGAAGGCGCGGATCTGTTTCACGGTCATAGGAAGCTCCAAGAGAGAATCAGCTGCAAGCTAGATGCGGCTTGCGGCTTGCGGCTTGCG GCTTGCGGCTTGCGGCTTGCGGCTTGCGGCTTGCGGCTTGCGGCTTGCGGCTTGCGGCTAATTATCCTGTTTTATAAATCAATCAACCTTAAAAATAAAC TTAACAAATGAATGCCTCGGCGCAACACTGCGGCTCACTCTCTTCATACGGCCGGCCAGCCGGCTGGCAACGCAAATACCAATAACAAGAGGATGTGCAG
DNA Sequence for Gene
>P637_RS0108220
ATGGCAGGTTTCGACAAGCGCGTGGCGTCCTACGAGGAAGCCCTCGAAGGTCTCAAGGACGGCATGACCGTGATCTCCGGCGGCTTCGGCCTGTGCGGCA TTCCGGAAAACCTGATCGCCGAGATCAAGCGTCGCGGCACCCGCGACCTGACCGTGGTCTCCAACAACTGCGGCGTCGACGGCTTCGGCCTCGGCGTGCT GCTGGAAGACCGGCAGATCAGCAAGGTGGTGGCCTCCTACGTCGGTGAAAACGCCCTGTTCGAGAAGCAACTGCTGAGCGGCGAAATCGAAGTGGTGCTG ACCCCGCAAGGCACCCTGGCCGAAAAAATGCGCGCAGGCGGCGCCGGCATCCCGGCCTTCTTCACCGCCACCGGCGTCGGCACCCCGGTCGCCGACGGCA AGGAAACCCGTGAATTCAACGGCCGTGCCTACCTGATGGAAGAGTCCATCACTGGCGACTTCGCCATCGTCAAAGGCTGGAAAGCCGACCACTTCGGCAA CGTGGTCTACCGCCACACCGCCCAGAACTTCAACCCGCTGGCGGCCACCGCCGGCAAGATCACCGTGGTCGAGGTCGAAGAGATCGTCGAACCGGGCGAG CTGGACCCGACGCAGATCCACACCCCCGGCATCTACGTCGACCGGATCATTTGCGGCACGTTCGAAAAACGCATCGAACAGCGCACCGTGCGCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCCCACCCAACGACTGACGGAGAATAAAAAAATGGCTCTTACCCGCGAACAAATGGCTCAACGCGTCGCCCGCGAACTGCAGGACGGCTTCTACGTGA ACCTCGGTATCGGCATCCCGACCCTGGTGGCCAACTACATCCCCGACGGCATGGAAGTGATGCTGCAATCGGAAAACGGCCTGCTCGGCATGGGCGCCTT CCCCACCGACGACGAAGTCGATGCGGACATGATCAACGCCGGCAAGCAGACCGTCACCGCACGCATAGGCGCGTCGATTTTCTCTTCCGCCGAATCCTTC GCGATGATCCGTGGCGGCCATATCGACCTCACCGTGCTCGGCGCCTTCGAGGTCGACGTGCAGGGCAACATCGCCTCGTGGATGATCCCCGGCAAGCTGG TCAAGGGCATGGGCGGCGCCATGGACCTGGTGGCCGGTGCGGACAACATCATCGTCACCATGACCCACGCCTCGAAGGACGGCGAGTCGAAACTGCTGTC
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MAGFDKRVASYEEALEGLKDGMTVISGGFGLCGIPENLIAEIKRRGTRDLTVVSNNCGVDGFGLGVLLEDRQISKVVASYVGENALFEKQLLSGEIEVVL TPQGTLAEKMRAGGAGIPAFFTATGVGTPVADGKETREFNGRAYLMEESITGDFAIVKGWKADHFGNVVYRHTAQNFNPLAATAGKITVVEVEEIVEPGE LDPTQIHTPGIYVDRIICGTFEKRIEQRTVRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site