Pseudomonas chlororaphis YL-1, P637_RS0107930

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis YL-1 contig31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCTGCAAGAACGCCTGCAACCCTCGTTGCTCGATCGCCTGACCGACGATGATCCGCACAACCCGAAAGAAGCCGCCGAACGCCGCGTCATGTCGCTGA CCCAGCTGAAAGCGTGCGTGCTGCGCGATCTGGCCTGGCTGTTCAACACCTGCGTGCTGTTCGATCCGGAGCAGGCCGCGCAGATGCCGGCGGGCAACTC GGTGCTGAATTTCGGCCTGCCGCCCCTGGCCGGACATACCGCCTCGAGTGTCGATGTACAGGCCATCGAAGCCTTGTTCAGCGACACCATCGCCACCTTT GAGCCGCGCATCCTCAAAGGCTCGTTGAAGGTTCGCGCGCGACTCGACGGCAATGACATGAGTCACAACGCCCTGAGCTTCGAGATCGAGGGCGATCTGT GGGCCGAGCCGGTGCCCCTGCGCCTGCTGCTCAGCACCGCCCTCGACCTGGAAACCGGGCACGTCAAGGTGACGCCGGCCGAGCCCGCCAGGAGACGCCA
DNA Sequence for Gene
>P637_RS0107930
ATGAACCCGCGCATGCTCGAGTATTACAACCAGGAGCTGCAGCATATCCGCGAGAGCGCCGCCGAGTTCGCCCAGGAGTTCCCCAAGATCGCCAGCCGCC TGACCCTGTCCGGCATCGAATGCGCCGACCCCTATGTCGAACGCCTGCTGGAGGGCTTCGCCTACCTGAGCGCGCGGGTCCACCTGAAGCTGGACGCCGA ATACCCGACCTTCACCCACAATCTGCTGGAAATCGCCTACCCCCATTACCTGGCGCCAACGCCTTCGGTGGTGGTGGTCCAGCTGGTCGCCGACCCCAAC GAGGGCTCACTGACCAGCGGCTTCAGGGTCGAACGCCAGGCCGCCCTGCGTGGCCAGCTCGGCCATGGCGAGCAGACCGCCTGCGAATACCGCAGCGCCC ATGCGGTGACGCTGTGGCCGTTGCAGGTCGGCCATGCCGAATACTTCGGCAACCCGGCGGCGACCCTCGGCCGCCTGGCCGCCAGCGAACCCAGGGCCAA GGCCGGGCTGCGCCTGCGCTTGCGCTGCGGCGCCGGGTTGCCGTTCAACGCCCTGGCGCTGGACAGCCTGCCGCTCTACCTCAATGGCGCCGACGAGCAA CCTTTTCGTCTGTACGAGCAGTTGCTCGGCAATGCCTGTGCCGTGTTTATCAAGAGCGTCGACGGCGACTGGGCCGAGCGCTTGCCTGTGGAGAGCCTCA AACCCCGCGGCTTCGACGATCAGGACGCGGTGCTGCCGGTGGTGCCCCGGGCCTTCCAGGGGTATCGCCTGCTGCAGGAATATTTCGCCCTGCCCAACCG CTTCCTGTTCGTCGACTTCACCGGGCTGAGCGCCGGTGTGCAGCGCTGCGGCAGCCAGGAACTGGAGTTGGTGGTGCTGTTCGATCGCCTCGACAGCACC CTGGAAGGCACGGTGTCGGCGGCCCAGTTCGTGCCCTTCTGCACGCCGGCGGTGAACCTGTTTCCACGCCGCGCCGATCGCATTCACCTGAGCGAGCGGG TGCATGAGCACCAGGTGATCGCCGACCGCACCCGGCCACTGGATTTCGAGATCCATTCCCTGACCCAGGTCACCGGCCATGGCAGCGGCCCCGAGCAGCC GTTCCAGCCGTTCTATGCGATCCGCGACCCGCTGCGTTATGGCCGCGAGCAGGCCTACTACATCGTCCGCCGCGAGCCGCGTCGCCTGTCCAGCCAGCAA CGGCGCCGCGGGCCCCGCTCGACCTATATCGGCAGCGAAACCTTCGTCTCGCTGGTGGATGTCAACCAGGCGCCCTATCGCCACGACTTGCGCCAGCTCG GCCTCAGCGCCCTGTGCACCAACCGCGACCTGCCGTTGCTGATGCCAGTGGGGACCGGCAAAAGCGATTTCACCCTGGAAGACAGCGCCCCGGTGCTGGC CGTGCGCTGCCTGGCCGGGCCAAGCCGGCCACGGCCGAGCCGCGCGCACGATGCCAGCGCCTGGCGGCTGATCAGCCAGCTATCGCTGAACTACCTGTCG CTGAGCGAACAGGGCCAGGGGGCCGCGGCGCTGCGCGAATTGCTGCGCCTGTACGGCGACCCCGGCGATTCGGCGCTGCAGTTGCAGATCGAAGGCCTGC GCCAGGTGCGCAGCACGCCCTGCACCCGCCGGTTGCCGATGCCGGGGCCGATCGTGTTTGGCCGTGGCCTGGAGATCAGCCTGGAGTTCGACGAAAACGC CTTCCGCGGCACCGGCGTGTACCTGCTGGGCGCGGTGTTCGAGCGTTTCCTGGCCCGTTACGTGTCGATCAACAGCTTCACCGAAACCGTGCTGCGCACC ACCGAGCGCGGCGAAATCATGCGATGGCAGGCGCACCCCGGATGTCGACCGAACCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCGCTGCACAGCATCGATCGGATGGCCGACGAGCCCTGGGCCTACGACTTCTTCCAGGCGCTGCGGCGCATCGAGTGCGAGGCCAGCGACCGGCCGCG CATCGGCCATTCCCTGCGCTTGCACGACGACCCGCTGCGCCTGGGGCAGAGACCCGACTGCGGCTTTGCCCCCTCGACCCTGGCCAGTATCGAGGCCGAC CCCGAGGGCGCCGCGCCGCGCATCGAGCAGTTCTTTTTCGGCCTGACCGGGCCCAACGGCCCGCTGCCGCTGCACCTGACCGAATACGCCCGCGATCGCC AGCGCAACAGCGGCGACGCCAGCTTCACGCGCTTTCTCGACGTGTTCAATCACCGCTTGTTGTGCCTGTTCTACCGCGCCTGGGCCGAGGCGCGGCCGAC CGTCAGCCACGACCGCCCCGACCACGACTACTGGTCGATGCGCCTGGCCGCACTGTCCGGACGGGGCATGACCAGCCTGCTCGGCCAGGGCCCGATCGCC
Amino Acid Sequence
>type VI secretion system protein ImpG
MNPRMLEYYNQELQHIRESAAEFAQEFPKIASRLTLSGIECADPYVERLLEGFAYLSARVHLKLDAEYPTFTHNLLEIAYPHYLAPTPSVVVVQLVADPN EGSLTSGFRVERQAALRGQLGHGEQTACEYRSAHAVTLWPLQVGHAEYFGNPAATLGRLAASEPRAKAGLRLRLRCGAGLPFNALALDSLPLYLNGADEQ PFRLYEQLLGNACAVFIKSVDGDWAERLPVESLKPRGFDDQDAVLPVVPRAFQGYRLLQEYFALPNRFLFVDFTGLSAGVQRCGSQELELVVLFDRLDST LEGTVSAAQFVPFCTPAVNLFPRRADRIHLSERVHEHQVIADRTRPLDFEIHSLTQVTGHGSGPEQPFQPFYAIRDPLRYGREQAYYIVRREPRRLSSQQ RRRGPRSTYIGSETFVSLVDVNQAPYRHDLRQLGLSALCTNRDLPLLMPVGTGKSDFTLEDSAPVLAVRCLAGPSRPRPSRAHDASAWRLISQLSLNYLS LSEQGQGAAALRELLRLYGDPGDSALQLQIEGLRQVRSTPCTRRLPMPGPIVFGRGLEISLEFDENAFRGTGVYLLGAVFERFLARYVSINSFTETVLRT TERGEIMRWQAHPGCRPNL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site