Pseudomonas chlororaphis YL-1, P637_RS0107175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 contig27, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGCCGGCACCCTGCGGCTGATCGCCGGCGAGTTCGACGGCGTCAAGGGCCCGGCGCGCACCTTCACCCCGATCGACGTCTGGGACATCCGCCTGAAT GCCGGCAAGCCCCTGACCCTCGACCTGCACCAGGGGCGCAACACCGCCCTGGTGCTGCTGCGCGGCACGGTCCAGGTCAATGGCCAGGAGCTGGTGCGCG AAGGTCAGCTGGTGCTGTTCGAACGCGATGGTGACCAGATCAGCCTGGAAGCCAACGACGACGCGGTGGTGCTGCTGCTCAGCGGTGAACCGATCGACGA GCCCATCGTCGGCCATGGCCCGTTCGTGATGAACAGCGAGGCCGAGATCCACCAGGCATTCGTCGACTTCCAGTCCGGCCGTTTCGGCCAGATGCCTGGC TGACACCCCCTTACCGACTTGCACAGGATGTGTAGGCCGGTTTCAGGGCCAGGGATGGCTGTTGCCTTAAATAAATGCCTAGACACAAGAGGAACTGCAC
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| DNA Sequence for Gene |
>P637_RS0107175
ATGAACACCCTCAACGCGGCCAACTTCAATGGCCTGAAACCGACCATCGACCCCAACGACGCGGCAATGCTGCTGATCGACCACCAGAGCGGCCTGTTCC AGATCGTCAAGGACATGGACGTGCCGCAACTGCGGGCCAATGCCATCGCCCTGGCGAAAGCCGCGACCCTGTTGCAGATGCCGGTAATCACCACGGCCTC GGTACCCCAGGGGCCCAACGGCCCGCTGATCCCGGAAATCCACCAGGAAGCGCCCCATGCCCGGTACGTGGCCCGCAAAGGCGAAATCAACGCCTGGGAC AATCCCGAGTTCCGGGCGGCGGTCGAGGCCACCGGCAAGAAAACCCTGGTGATCGCCGGCACCCTGACCAGCGTCTGCCTGGCGTTCCCCTCGATCGCCG CGGTGCATGAAGGCTACAAGGTGTTCGCGGTGGTCGATGCCTCGGGCAACCATTCGCGGCTGGCCACCGATCTGACCATCGCCCGCCTGGCCCAGGCCGG GGTGGTGCCGATCGACATCATGGCCACGCTCTCCGAACTGCAGGGTTCGTGGAACCGTCCGGACGCCGAGCAGTGGGCCGCGGTCTACGCCCAGGCCATG CCGCACTATCAGTTGCTGATCGAGAGCTACCTCAAGGCCCAGCAAGTGGCGAATGAACACGAAGTGCTGGATTCCCAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCAGCACCCCCCACGCCGATTTCCAGTCGGTATCGACAAGAAGCGAGGATTACCCCATGACTACTGCCTACAAGCGTCTCGATAAAGACAATGCCGCCG TGCTGCTGGTGGATCACCAGGCCGGCCTGCTGTCCCTGGTGCGCGACATCGACCCGGACAAGTTCAAGAACAACGTGCTGGCCCTGGCCGACCTGGCCAA GTACTTCAAGCTGCCGACCATCCTCACCACCAGCTTCGAAACCGGCCCCAACGGCCCGCTGGTGCCCGAGCTCAAGGCGCTGTTCCCGGACGCGCCGTAC ATTGCCCGGCCCGGCCAGATCAATGCCTGGGACAACGAGGACTTCGTCAAGGCGATCAAGGCCACCGGCAAGAAGCAGCTGATCATCGCTGGCGTGGTGA CCGAGGTCTGCGTGGCGTTCCCGGCGCTGTCGGCCCTGGAAGAAGGCTTCGAGGTGTTCGTGGTGACCGACGCCTCCGGCACCTTCAATGAGCTGACCCG
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| Amino Acid Sequence |
>nicotinamidase
MNTLNAANFNGLKPTIDPNDAAMLLIDHQSGLFQIVKDMDVPQLRANAIALAKAATLLQMPVITTASVPQGPNGPLIPEIHQEAPHARYVARKGEINAWD NPEFRAAVEATGKKTLVIAGTLTSVCLAFPSIAAVHEGYKVFAVVDASGNHSRLATDLTIARLAQAGVVPIDIMATLSELQGSWNRPDAEQWAAVYAQAM PHYQLLIESYLKAQQVANEHEVLDSQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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