Pseudomonas chlororaphis YL-1, P637_RS0104115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 contig15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATGGCCGGGCAGAACCACCATTTCAGCCAGTTCGCCCCGGAGAAAATCCCTTACGCGATCAAACGCTACGTCGATGAAACCGCGCGCTTGTACGGGGTG CTGGACCGACGCCTGGCGGACCGCGATTTCGTCGCTGGCAGCGAATACAGCATCGCCGACATGGCGATCTATCCGTGGATCGTCTCCCACAAGTGGCAAA GCCAGAATCTGGAAGACTTCCCCAACCTGCATCGCTGGTTCAACCGCATCCTCGATCGCCCCGCGACCGCGCGCGCCTATGCCATCGCCGCCCGGATCAA CCCACCCAAATCCTGAGGCCCGATAGTCCACTGCCGGCCGGCAAACAGCGGTGGCTGCTCTGTTCCGGGCAACTACCGAACGGCCGGCGCGGGCTATTTA TCCGGCAACGCAGAAATACTCTCAGCCCCCGCTTGCGCGGCACTCGCCTGCTCACTAACGTAGCGCCTTTATCGACGCTACCCCCCGCAGGAGCTTTGCC
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| DNA Sequence for Gene |
>P637_RS0104115
ATGGCCTCGCCAGCCTTCTCACATTTTCTTCCCCGGTTCGGCGTTGCCGCGGCAGTGGCCGGCGTTCTCAGCCTGGCCGGTTGCCAGTCATGGAACACCC AGGACAGCCTGCCGCCGACCTCTGGCGTGCAACCGCTCAAGGGCCTGGCCCAGAACGTTTCGGTCCGGCGCAATGCCATGGGCATGCCGCTGATCGAAAG CAGCACCTTCCACGATGCGCTGTTCGCCCTGGGTTACGTGCACGCCAGCGACCGGATCAACCAGATGGTGACCCTGCGCCTGCTGGCCCAGGGCCGGCTG GCCGAGATGTCCGGTGCCGACGTTCTGGACGTCGACCGCTACATGCGCGCGGTCAACCTGAAGAACAGTGCCGGCGAGCTGTACAAAGCCTCGTCCCCGA GGATCAAGCGCTTCTTCGAGGTCTACGCCCGCGGGGTCAACGCCTACCTGTTCCGCTACCGCGACAAGCTGCCGCCAGACCTGGCCGCCACCGGCTACAA GCCCGAATACTGGAAACCGGAAGATTCGGCGCTGATCTTTTGCCTGCTGAACTTCAGCCAGTCGGCCAACCTGCCGGAAGAAATCAACGCCCTGGTGCTG GCGCAGAAAGTTGGCGCCGACAAGCTCGCCTGGCTGACCCCGAGCTACCCGGACGAAGCGCTGCCGCTGGCCGAGAGCGACAAGCTCAAGGGCCTCAACC TGAATGTCCCGGGTTTGAGCGAAATCAGTGCCGCCGCCGGCAAGCTTGGCGAACTCAACCCGCTGAGCATCGCCGGCGCCAGCAACTGGGCCATCGCTCC CCAGCGCAGCCGCAGCGGCAAAAGCCTGCTGGCCGCCGACAGCCACTCGCCGGCATGGAACCTGGTGCAGATCCGCGCGCCCAAGTACCAGGCCGCGGGC GCCTCGATCGCCGGCCTGCCGATGATCATCCAGGGCTTCAACGGCAAGGTGGCCTGGAGCATGACCTCGGTCGCCGGTGACAACCAGGACCTGTTCCTGG AAAAACTCAAGCGCCAGGGCAATGCGCTGTATTACGAAGCCAATGGCAAATGGCTGCCGGCCGTGGTGCGCAACGAAACCTACTTCGTCAAAGGCCAGCG GCCGATTCGCGAGGTGGTCTATGAAACCCGTCACGGCGCCCTGCTCAACAGCGCCAGCAACCTGAGCGGCGGCTACGGCCTGGCCCTGCAACAGCCGGAC CTCAAGGACGATAAGAGCCTGGACGCGTTTTTCGACCTGTCGCGGGCGCAGAACGTGGAGCGAGCCTCCGACGCCAGCCGCGAGATCCGCGCTATCGGCC TGAACATGCTGTTCGCCGATGCCAGCCATATCGGCTGGCAGGTCACCGGCCGCTTCCCCAACCGCCGTGAAGGCGAAGGCCTGCTGCCGTCGCCGGGCTG GGAAGGCCGTTACGACTGGGACGGCTATGCCGACCCGATGCTCCACCCCTATGACCAGGACCCGGCCCAGGGCTGGCTGGGCACCGCCAACCAGCGGATC ATCCCCCACGGCTATGGCATGCAGCTGTCCAACTCCTGGTACTACCCCGAGCGTGGCGAACGCCTGGCCGAGTTGGCCGGCAGCGGCAAGCACGACGGCC GCAGCATGATCGCCATGCAGTACGACCAGACCACCCCCTTCGCCGCCAAGCTGAAGAAGATGTTCGAAGCCCCCGGCATGGCGCAGCCCCTGAAGAAAGC CATCGACGCCCTGCCCGAAGCCGAGCGCAGCAAGGCCCGCGAGGCCTACAGCCGCCTGATGGCGTTCGACGGCAAACTCAGCCCGGTATCGGCCGATGCG GCGATCTATGAGCTGTTCCTGCAGGAAAGCGCCCGGCAGATCTTCCTCGACAAACTGGGTTCGGAATCCAGCCCGGCCTGGAAGGCCCTGGTGGCCAACA GCGCGCTGTCCTACTCGGCCCAGGCCGACCATTTGCTGGGCCAGGAAGACAGCCCGTTCTGGGATGACAGCCGCACCCCACAGAAAGAAGACAAGCCGGC GATCCTCGCCCGCAGCCTGGCCGCCGCCATCAGCGCCGGTGAAAGCCAGCTGGGTGGCGACCGCAGGGCCTGGCAGTGGGGCAAGCTGCACAGCTACCAC TGGAAGAACGCCAATGGCCAGGTCGTTCGCGGGCCGCTGCAGGCCGGTGGCGATCACAGCACCCTGAACAGCTCGCCGTACCGCTGGGGCCAGGACTTCA CGGTGACCGAGGCGCCGGCGCTACGGTTGATCGTCGATTTCGGCCAGAGCGAACCGCTGAGCGTCATCAACAGCAGCGGCCAGTCGGGCAACCCGGCCAG CCCGAACTACCTGAATGGCATCGACGCCTGGCTCAAGGGCCAGTACCTGAGCTTGCCGCTGCAACCGCAGAACTTCGACCGCCTCTACGGCAAGACCCGC CTGACCCTGGCGCCAGGCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACCGGCCAGCCCGCCCCTCTCCACAAGGGGCGGGCTTGAGCCCGGTAACGCTTCACTCCCCTCGCCGATCCAGGCCTGCCACGCTCCCGGCAGCCGCGC CCTTTCCTGCGCGAAATCGCCCACGCGCCCTATTGATGCAAGGCTTCCCACACGCTCTTTTTTGGGGCGCGGCCGACGCACGGCAGGCTCTGGCACCACC TTTTAAAACAGTTGTTCGGGACTCTGGTTCGGAAATTGCTACTTTCATTAAGTCTGACGCGTTGCAGTAACAGTACTAATGCGCCACAAGCGCTCATATT GGTTTTTAGGGATTTAATAATGAAAAAAGCATTGCTGACCCTTTCTGCACTGGCTCTCTGCATGGCCGCCGGTTCCGCGCTGGCCAAGGAATACAAGGAA CTGCGCTTCGGCGTTGACCCGTCCTACGCACCTTTTGAATCCAAGGCCGCCGATGGCAGCCTGGTCGGCTTCGACATCGATCTGGGCAATGCCATCTGTG
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| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MASPAFSHFLPRFGVAAAVAGVLSLAGCQSWNTQDSLPPTSGVQPLKGLAQNVSVRRNAMGMPLIESSTFHDALFALGYVHASDRINQMVTLRLLAQGRL AEMSGADVLDVDRYMRAVNLKNSAGELYKASSPRIKRFFEVYARGVNAYLFRYRDKLPPDLAATGYKPEYWKPEDSALIFCLLNFSQSANLPEEINALVL AQKVGADKLAWLTPSYPDEALPLAESDKLKGLNLNVPGLSEISAAAGKLGELNPLSIAGASNWAIAPQRSRSGKSLLAADSHSPAWNLVQIRAPKYQAAG ASIAGLPMIIQGFNGKVAWSMTSVAGDNQDLFLEKLKRQGNALYYEANGKWLPAVVRNETYFVKGQRPIREVVYETRHGALLNSASNLSGGYGLALQQPD LKDDKSLDAFFDLSRAQNVERASDASREIRAIGLNMLFADASHIGWQVTGRFPNRREGEGLLPSPGWEGRYDWDGYADPMLHPYDQDPAQGWLGTANQRI IPHGYGMQLSNSWYYPERGERLAELAGSGKHDGRSMIAMQYDQTTPFAAKLKKMFEAPGMAQPLKKAIDALPEAERSKAREAYSRLMAFDGKLSPVSADA AIYELFLQESARQIFLDKLGSESSPAWKALVANSALSYSAQADHLLGQEDSPFWDDSRTPQKEDKPAILARSLAAAISAGESQLGGDRRAWQWGKLHSYH WKNANGQVVRGPLQAGGDHSTLNSSPYRWGQDFTVTEAPALRLIVDFGQSEPLSVINSSGQSGNPASPNYLNGIDAWLKGQYLSLPLQPQNFDRLYGKTR LTLAPGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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