Pseudomonas aeruginosa PACS2, A0K_RS20260
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.420.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd06127 | DEDDh | - | - | 33 | 196 | 8.02111E-42 |
| SMART | SM00479 | exoiiiendus | IPR013520 | Exonuclease, RNase T/DNA polymerase III | 31 | 204 | 8.8E-26 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | IPR012337 | Ribonuclease H-like superfamily | 22 | 201 | 3.68E-36 |
| Gene3D | G3DSA:3.30.420.10 | - | IPR036397 | Ribonuclease H superfamily | 25 | 202 | 9.0E-34 |
| Pfam | PF00929 | Exonuclease | IPR013520 | Exonuclease, RNase T/DNA polymerase III | 34 | 194 | 3.9E-19 |
| PANTHER | PTHR30231 | DNA POLYMERASE III SUBUNIT EPSILON | - | - | 30 | 195 | 7.6E-17 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.