Pseudomonas aeruginosa CF_PA39, AX20_RS0125665
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold48, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGCTGGTGGAGGTGGAAGGCGCTCCGCGCGCCGTGGCCGAGGGCGACTGGCTCTGGTATAACCTCGCCACCCCGCCGCGCCTGGGCCTCGCCGCTCC GGTGAAGAAGCTGCTCAAGCGCGCAGAACAGGAACTCGGACGCGGCACGGCCGCGTGAATGCCGGGCCCGCGGCCCGGCGGCAACTGCAGGAGAACGACC ATGAGCCGCACCGTGATGTGCCGCAAGTACCACGAAGAGCTGCCCGGCCTCGACCGCCCGCCGTATCCTGGCGCGAAGGGCGAGGACATCTACAACAACG TGTCGCGCAAGGCCTGGGACGAGTGGCAGAAGCACCAGACCATGCTGATCAACGAGCGTCGCCTGAACATGATGAACGCCGAGGACCGCAAGTTCCTCCA GCAGGAGATGGACAAGTTCCTCTCCGGCGAGGACTACGCCAAGGCGGACGGCTACGTGCCGCCATCCGCCTGACCCCCCCCCCGCCCGACGGAGGCCGCC
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| DNA Sequence for Gene |
>AX20_RS0125665
ATGACCCCATCCCTCTCTGGCCTGCCTCCGATCCGCACCGCGCTGATCGGCTACGGCTTCGCCGGCAAGACCTTCCACGCCCCGCTGATCCACGCGGTAC CGGCGTTGCGCCTGGAGCGCGTGGTCTCGCGCGACGCCGGGCGGGTGCACGCTGACCTGCCCGAAGCCCGGGTCAGCCCCGATCCGGATGAGGTCATCGA GGCCGCCGACATCGACCTGGTGGTCATCGCCTCGCCCAACGCCACCCACGCCAGCCTCGCCGAACGGGCCTTGCGCGCCGGCAAGCACGTGGTGGTGGAC AAGCCGTTCACCGTCACCCTGGCCGAAGCCCGGCGCCTCGCCGACCTCGCCCACGAACGGCCTGGACAGGTCCTCTCGGTGTTCCAGAACCGGCGCTTCG ACAGCGACTTCCTCGCCGTGGAGGCCGCCCTCCAGGCCGGCAGCATCGGCCCGGTGCGCTACTTCGAATCGGCCATCGAGCGCTTCCGTCCGCAGGTCCG CGACCGCTGGCGCGAACACGACCTGCCCGGCTCCGGGCTGTGGTTCGACCTCGGCCCGCACCTGCTCGACCAGGCGCTGTGCCTGTTCGGCGTACCGCAA CGTGTGCACGCACACCTGCGCCGGCTGCGCGAGGGCGCGCTGACCGACGACTGGTTCGAGGTCCTGCTCGACTATCCGCGATGCCAGGTGGCGCTGCGCG CCAGCATGCTCGCCGCCAACCCGGCGCCGCGCTTCAATGTGCACGGCGACCACGGCAGCCTGCTCAAGGCCGGCGCCGACATCCAGGAAGCGCAACTGCT CCAGGGACTGCACCCCGGTTCCGCCGGCTGGGGCCGCGATCCCGACCTGTTGCAGCACATCGACGGCCAAGGCCTGCGCCAGTCGCTGGTCACCCCGGCT GGCGACCAGAGCCGCTACTACCAGGCGCTGGCCGCCGCCATCCGCGGCCAGTCGCGCAACCCGGTGACGGCGGAACAGGCCTGCGCGCTGATGGCCCTGC TGGAGCTGGCGCGGCGCTCCGCCGAGGAAGGCCGGGGCCTGCCGGTGGAGCTGCGCGACGAGGAACGCCAGGCCTGGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCCGGCAGTCCGGCGGAAACCGCGAGGGGATCGTAAGGCGTTAAAAAACAAAAAAAATTTCTTCGCCGGTGTTGACACTGCCGCGCTAAACCCGTTTA ATTGCGCCCCGTTGCCCAGGTAGCTCAGTTGGTAGAGCAGGGGATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCCCTGGGCACCATGAATACGACG AAAAGGCTCACCTCCGGGTGGGCCTTTTTGCTTTCCGCCGTTCGCTAGACGTGCTGCCCGCCGTTGACGTGGATTTCCGCGCCATTCACGTAGGATGCGC CGCCGGTGCAGAGGAAGTAGATCAGCGAAGCGATCTCCTCCGGCCGGCCGAGGCGGTGCAGCGGGATGCTGCGCTCGACGATCTCCTCGGTGCCCGGCGA CAGGATCGAGGTGTCGATCTCCCCCGGCGCGATGGCGTTCACCCGAACCCCATGCGGGCCGAAGTCGTGGGCCATCTCGCGGGTCAGCGCGGACAACGCC
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| Amino Acid Sequence |
>dehydrogenase
MTPSLSGLPPIRTALIGYGFAGKTFHAPLIHAVPALRLERVVSRDAGRVHADLPEARVSPDPDEVIEAADIDLVVIASPNATHASLAERALRAGKHVVVD KPFTVTLAEARRLADLAHERPGQVLSVFQNRRFDSDFLAVEAALQAGSIGPVRYFESAIERFRPQVRDRWREHDLPGSGLWFDLGPHLLDQALCLFGVPQ RVHAHLRRLREGALTDDWFEVLLDYPRCQVALRASMLAANPAPRFNVHGDHGSLLKAGADIQEAQLLQGLHPGSAGWGRDPDLLQHIDGQGLRQSLVTPA GDQSRYYQALAAAIRGQSRNPVTAEQACALMALLELARRSAEEGRGLPVELRDEERQAWN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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