Pseudomonas aeruginosa CF_PA39, AX20_RS0125025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold44, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGTTGGCCTGCTGGAAGAGATCGAGGCCTGGCCGCAGGGCTGGGACAGCGATGTCGGACCCGGCGGCGCGCTGCTGTCCGGCGGCCAGCGGCAACGC CTGTGCCTGGCTCGCGGGCTGCTCTCGACGGCGCCGTTGCTGCTGCTCGACGAGCCCACCGCCAGCCTCGATGCCGCCAGCGAGGCGCAGGTGCTGCGCA GCCTGCTCGGGTTGCGTGGCCGGCGCACCCTGCTGGTAGTGACCCACCGCCCGGCACTGGCGCGTCAGGCCGACCAGGTACTGCTGCTGGAGGAAGGGCG CCTGCGCCTGAGCGGACGTCACGCCGAGCTGCTCGTCCGGGACGATTGGTATGCCGGTTTCGTCGGGCTGGCGGACGAGGAAAGTTCCGCGACGGTCGTG GATCGATAGAGAAAGACCGGCAATCGAAAAAGCCCCGGAGACGATTTCTTCATAATGATAAGCATTATCAAATCGTATATCCCCCGAGGCTGTTCGAACG
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| DNA Sequence for Gene |
>AX20_RS0125025
ATGAAAACGGAGACGAAGGTGATCAAGGGACGCCAGGGCATCGCCCGCAATCGGCACACCCCGTTGTGCCTGGGCCTGCTGCTGGCGCTGAGTCCGCTGG CGGTAGCCGTGGCCGACGCGCGCAAGGACGGCGAGACGGAACTGCCGGACATGGTGATCAGCGGAGAAAGCACGTCCGCCACCCAGCCGCCGGGGGTGAC CACCCTGGGCAAGGTGCCGCTCAAGCCGCGCGAGCTGCCGCAGTCCGCCAGTGTCATCGACCATGAGCGCCTCGAACAGCAGAACCTGTTCAGCCTCGAC GAAGCCATGCAGCAGGCCACCGGGGTCACCGTGCAGCCGTTCCAGCTGCTGACCACCGCCTACTACGTGCGCGGCTTCAAGGTTGACTCCTTCGAGCTGG ACGGGGTGCCGGCACTGCTCGGCAATACCGCCAGTTCGCCGCAGGACATGGCGATCTACGAGCGGGTCGAGATCCTCCGCGGCTCCAACGGACTGCTGCA TGGCACCGGCAACCCGGCGGCCACCGTCAACCTGGTGCGCAAGCGGCCGCAGCGCGAATTCGCCGCCAGCACCACCCTCAGCGCCGGGCGCTGGGACCGC TACCGCGCCGAGGTCGACGTCGGCGGCCCGCTGAGCGCCAGCGGCAACGTGCGCGGCCGAGCGGTGGCCGCCTACGAGGACCGCGACTACTTCTACGACG TGGCCGACCAGGGCTCCCGCCTGCTCTACGGGGTGACCGAGTTCGACCTGAGCCCCGACACCCTGCTCACCGTCGGTGCGCAATACCAGCACATCGACTC GATCACCAACATGGCCGGGGTACCGATGGCCAAGGATGGGTCCAATCTCGGGCTCTCCCGCGACACCTACCTCGATGTCGACTGGGACCGCTTCAAGTGG GACACCTACCGCGCCTTCGGCTCCCTCGAACAGCAACTGGGCGGCGGCTGGAAAGGCAAGGTCAGCGCCGAATACCAGGAAGCCGATTCGCGCCTGCGTT ACGCCGGCTCCTTCGGCGCCATCGACCCGCAGACCGGCGACGGCGGCCAACTGATGGGCGCCGCCTACAAGTTCAAGAGCATCCAGCGCAGCCTCGACGC CAACCTCAACGGGCCGGTGCGACTGTTCGGCCTGACCCACGAACTGCTCGGCGGGGTCACCTACGCCCAGGGCGAGACCCGCCAGGACACCGCACGCTTC CTCAACCTGCCGAACACCCCGGTCAATGTCTACCGCTGGGACCCGCACGGCGTGCCGCGCCCGCAGATCGGCCAGTACACTTCGCCGGGCACCACCACCA CCACCCAGAAAGGCCTCTATGCCCTGGGCCGGATCAAGCTCGCCGAGCCGCTGACCCTGGTGGTCGGCGGCCGCGAAAGCTGGTGGGACCAGGACACCCC GGCCACCCGCTTCAAGCCCGGTCGCCAGTTCACGCCCTACGGCGGGCTGATCTGGGACTTCGCCAGGGACTGGTCGTGGTATGTCAGCTACGCCGAGGTC TACCAGCCGCAGGCGGATCGCCAGACCTGGAACAGCGAGCCGTTGAGCCCCGTGGAAGGCAAGACCTACGAGACCGGGATCAAGGGCGAACTGGCCGACG GCCGCCTGAACCTGTCGCTGGCGGCGTTCCGCATCGACCTGGAGAACAATCCGCAGGAAGACCCAGACCATCCGGGGCCGCTCAACAATCCGTTCTACAT CAGCGGCGGCAAGGTGCGCAGCCAGGGCTTCGAGCTGGAAGGCACCGGCTACCTGACGCCCTACTGGAGTCTCTCGGCCGGCTACACCTACACCAGCACC GAGTACCTCAAGGACAGCCAGAACGACTCGGGGACGCGCTACTCCACCTTCACCCCGAGGCACCTGCTGCGCCTGTGGAGCAACTACGACCTGCCCTGGC AGGACCGGCGCTGGAGCGTCGGCGGCGGACTCCAGGCGCAGAGCGACTACAGCGTCGACTACCGTGGCGTGAACATGCGCCAGGGCGGCTACGCACTGGT CAACATGCGCCTGGGCTACAAGATCGACGAGCACTGGACGGCGGCGGTCAACGTCAACAACCTGTTCGACCGGACCTACTACCAGAGCCTGTCCAACCCC AACTGGAACAACCGCTACGGCGAACCGCGCAGCTTCAACGTCAGCCTGCGGGGCGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCCGCGCCAGTCGGGCTTCGGCTGGGCCTGGCGGGTTCCGCTGGCGCTCGCCGGCAGCCTGGCGGCGGCGACCGCCAGCGGCTATCTGTTGACTCGCGG GCTGCCCCTGGACGACCCGCTCGAGCGTCTCTACGCCGGGCTCTTCGGCGCGCTCGGGGTGGGCTTGTTGCTGCTTGTCGGCGGGTTGCTGGCGCGTGAT CCGGGCAACCTCGCCTGGCGCCTGGGCGGTAGCCTGCTGGCACTGGGGCTGGCGTTGTGGCTGCTGGCGGGGCGCGGCTGAAGTGGCGGCGCGTCCTCTC CTGCTCTCGCTGCACGGTGGCGCCGGCGCGCTGTTCGGCGTGCTGCTGTTCGTGGTGCTGTTCAGTGGCGCCTGGAGTCTTGGCCATGACGACCTGCGCG AGTGGCTGCGGGCCCCGGCGCAGGCGGGAGGAGAAGCCCTTGCGCTGGAGCGCCTGCTCGAACGGGCGGGCGAGGAAGGCGTCGACATCCGCGATGCGAC
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| Amino Acid Sequence |
>amino acid ABC transporter substrate-binding protein
MKTETKVIKGRQGIARNRHTPLCLGLLLALSPLAVAVADARKDGETELPDMVISGESTSATQPPGVTTLGKVPLKPRELPQSASVIDHERLEQQNLFSLD EAMQQATGVTVQPFQLLTTAYYVRGFKVDSFELDGVPALLGNTASSPQDMAIYERVEILRGSNGLLHGTGNPAATVNLVRKRPQREFAASTTLSAGRWDR YRAEVDVGGPLSASGNVRGRAVAAYEDRDYFYDVADQGSRLLYGVTEFDLSPDTLLTVGAQYQHIDSITNMAGVPMAKDGSNLGLSRDTYLDVDWDRFKW DTYRAFGSLEQQLGGGWKGKVSAEYQEADSRLRYAGSFGAIDPQTGDGGQLMGAAYKFKSIQRSLDANLNGPVRLFGLTHELLGGVTYAQGETRQDTARF LNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKGLYALGRIKLAEPLTLVVGGRESWWDQDTPATRFKPGRQFTPYGGLIWDFARDWSWYVSYAEV YQPQADRQTWNSEPLSPVEGKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPLNNPFYISGGKVRSQGFELEGTGYLTPYWSLSAGYTYTST EYLKDSQNDSGTRYSTFTPRHLLRLWSNYDLPWQDRRWSVGGGLQAQSDYSVDYRGVNMRQGGYALVNMRLGYKIDEHWTAAVNVNNLFDRTYYQSLSNP NWNNRYGEPRSFNVSLRGAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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