Pseudomonas aeruginosa CF_PA39, AX20_RS0122340
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold34, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGCGACTGGCGCGACTTCCTGCTGCTGGCCAGCCGGCAGGAAGACCCGGATACCCTGTTCTTCCGCCGCCGCCTGGTGATCGAGGGCGACACCGAGTT GGGCCTGGCGGTCAAGAACCTCCTCGACAGCCTCGATCCGGAGCACCTGCCGCCCTGGTTGTGGAACGCCGTGGAGCGAGCCGGGCGGGCAGTGCAGGAG GAGCGCGGCGAGGCGCCCCAGGGGCCGGTCCAGGGGGCGCAGGGCGGCTGAGGTCGGTGGAAAGGGGCGTATAGCGACGCCAAGGCCGCTGAGCGCGCCC CTCCGATCTGAAGCCTGAAACTCACTGAGGCTCTTTTCATCGAGGCAACGCCCGGTCCGTTGCCGCATGGGCGGCGCGGAGCGAATACCCCGCAGCGGAC GCTCCTCCTGAGGAAACGGATAGCCTGTCTGTCGCCGTAACGCCCCTGTCAACTTGCCCCGGTAAACCGGACCTTCGTGAAGCCTGCGGAGAACTCCGGT
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| DNA Sequence for Gene |
>AX20_RS0122340
ATGAGTGGAATGGACCTCAAGCGCCGCCGCGTCGTGCAAGGCCTGGGCGCTGGACTGCTGTTGCCGGCGCTGGGCGCGCCGGCGGTGATCGCCTCGCCCA GGGCGCGGCCGAAGCTGACTGATGGCGTGCAGTCCGGCGACGTGCACGGCGACCGCGCGCTGGTCTGGAGCCGCACCGACCGCCCGGCGCGGATGATCGT CGAGTGGGACACCCGTAGCGTCTTCAGCGAGCCGCGCCGCCTGGTCTCGCCGGTCACCGACGAGCGCCTCGACTACACCGCGCGCATCGACCTGCGTGGC CTGCCAGCCGACCAGTCGATCTTCTACCGGGTGCGCTTCGAGGATGCCCGCGACGGCAGCCTGAGCAAGCCCTGGTTCGGCCACCTGCGCAGTGCGCCGA GCGAGGCGCGCAATATCCGTTTCGTCTGGAGCGGCGACACCTGCGGGCAAGGTTTCGGGATCAATCCGGATATCGGCGGTATGCGCATCTACGAAGCCAT GCGCCGGCGCCAGCCGGATTTCTTCCTGCACAGCGGCGACACCATCTATGCCGATGGACCGATCCCCGAACGCATCGAGACCGAGAGCGGGCGCATCTGG CGCAACCGGGTGACCGAGGCCAAGAGCAAGGTCGCCGAAACCCTCGACGAGTTCCGCGGCAACTACCGCTACAACCTGCTCGACGACAACCTGCGCCGCT TCAACGCCGAGGTGCCGCAGGTCTGGCAATGGGACGACCACGAGACCACCAACAACTGGTCCTCCAGCAAGCAGCTCGACGAGCGCTACCAGGTGAAGGA CATCGACGTGCTGGCGGCCCGCGCACGCCAGGCGTTCCTCGAATACGCGCCGCTGCGCTTCCAGCGCCAGGGGCGCGACGGACGGATCTACCGCAAGGTC GCCTACGGCCCTTTGCTCGACGTGTTCGTCCTCGACATGCGCAGCTACCGCGGCGGCAACAGCGCCAACTTGCAGGCGCGGCGCAGCGCCGCCACCGATT TCCTCGGCCGTGAGCAGTTGCAGTGGCTCAAGCGCGAGTTGCGCGGTTCGCGCGCGCAGTGGAAGGTGATCGCCGCCGACATGCCGATCGGCCTCTGCGT GCCCGATGGCAAGGACGCCCAGGGCCGCGACCGCTGGGAGGCCATCGCCAACGGCAACGACGGCGCCGCCCTCGGCCGCGAGCTGGAGATCGCCGACCTG CTGCGCTTCGTCCAGCGCGCCGGGGTGCGCAACACCGTCTGGCTGACCGCCGACGTGCATTACTGCGCAGCCCACCACTACAGCCCGGAGCGCGCCGCGT TCAAGGACTTCGCGCCGTTCTGGGAGTTCGTCGCCGGACCTCTCAATGCCGGTAGTTTCGGACCCAACGCGCTGGATGGCACGTTCGGCCCGCAGGTGAT GTTCCAGAAGGCCCCGCTGGTCCAGAACAGTTCCCCCTTCGCCGGCTACCAGTTCTTCGGCGAGGTGGAGATCGATGCGCAAAGCCGCGCGCTCACCGTC ACCCTGCGCGACCTCGACGGAGAGCCGGTGTTTTCCCAGGAACTGCAACCCGACGGCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCGGCGACCCCATTCCGATAAAGGAGTATCCCGATGCACCCCTTGCGTAACGCCGCCCTGCTGGGCGGCCTGGCCCTGCTGGGCCTGCCGGTGGCCA ACGCCGCCGAGCTGATCATTTCCGAGTATGTCGAAGGCAGCGGCAACAACAAGGCGCTGGAGTTCTACAACAGCGGCAGCCAGGTCCTCGACCTCTCCGC CTATCGCGTCGAGTTCTACTTCAACGGTGCCAGCGCGGCGGGCCGCAGCATCGACCTGAGCGGCAGCCTGGCGCCGGGCAAGACCTTCGTCCTCGCCAAC GGCGTGGCCGACCCGGCGCTGCTGGCGCTGGCCAGCCAGCGGGTGGAGGGCAGCTGGTTCAATGGCAACGATGCGGTGCTGCTGCGCCGGCGCAGCGGAG AGATCCTCGACAGCCTCGGCCAAGTCGGCTTCAACCCCGGCACGACCTGGGGCGGCGGCGATGTGCAGACCCTCGACCGGAGCCTGGTGCGCAAGGCCGA
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| Amino Acid Sequence |
>alkaline phosphatase
MSGMDLKRRRVVQGLGAGLLLPALGAPAVIASPRARPKLTDGVQSGDVHGDRALVWSRTDRPARMIVEWDTRSVFSEPRRLVSPVTDERLDYTARIDLRG LPADQSIFYRVRFEDARDGSLSKPWFGHLRSAPSEARNIRFVWSGDTCGQGFGINPDIGGMRIYEAMRRRQPDFFLHSGDTIYADGPIPERIETESGRIW RNRVTEAKSKVAETLDEFRGNYRYNLLDDNLRRFNAEVPQVWQWDDHETTNNWSSSKQLDERYQVKDIDVLAARARQAFLEYAPLRFQRQGRDGRIYRKV AYGPLLDVFVLDMRSYRGGNSANLQARRSAATDFLGREQLQWLKRELRGSRAQWKVIAADMPIGLCVPDGKDAQGRDRWEAIANGNDGAALGRELEIADL LRFVQRAGVRNTVWLTADVHYCAAHHYSPERAAFKDFAPFWEFVAGPLNAGSFGPNALDGTFGPQVMFQKAPLVQNSSPFAGYQFFGEVEIDAQSRALTV TLRDLDGEPVFSQELQPDGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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