Pseudomonas aeruginosa CF_PA39, AX20_RS0116235
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTTTACCTATCTCGCCGATGACGCCACCTTGCGTACCCTGACCTTCTGGAACCTGGGCAGCCTGAACGGCGCCAGCTACCCACGACTCTGGCCGCTGC TGCTGGTGGCGCTGCTGGTGGCCTGCTGGCTACCGCGCCGGGCAGATGCGCTGAACGCACTGCTGCTGGGCGAGTCCGAGGCCCGTCACCTGGGCTTCGA CGTCGAGCGATTGAAGGCCGAACTGGTGCTTTGCACTGCCCTTGGCGTCGGCGCCGCAGTGGCGGCGGCGGGGATGATCGGCTTCATCGGCCTGGTGGTG CCGCACCTGATCCGTCTGGTTGCCGGTCCGGATCATCGGACGTTGCTGCCGGCCTCGATGATGGCCGGCGCCATTCTCCTGCTGCTTGCCGACCTGCTGG CGCGCCTGGCGCTGGCTCCGGCGGAGTTGCCGATCGGCATCGTCACGGCACTGATCGGCGCGCCGTTCTTCCTTTATCTGCTATTGCGGGGGCGGGCCTG
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| DNA Sequence for Gene |
>AX20_RS0116235
ATGCTGCGCGTGGAGAACCTGTCCATCCGCCGTGGCGGAAAGACTGTACTGGAAGGCCTCGAACTGGAGCTGCGGCCTGGCGAGATGCTCGGCGTACTCG GCCCCAACGGCGCTGGCAAGAGCACCTTGCTTGGCGCTCTCTGTGGCGAACTGGAGCCGGCCGAAGGGCTGGTGCTGCTCGACGAGCGCGGCCTCGACGA CTGGCCGGGCGTCGCTCGCGCGCAGCGCCTGGCGGTGCTGCCGCAGAGTTCGTCGCTGGGCTTCGCCTTTCCGGTAGAGGCGGTGGTCGGCTTCGGTCGG CTGCCTCATTCCAGCGGTCGCGAGCGCGATGCGCAGATCGTCGCCGAGGCCTTGGCGGCGGCCGATGCCAGCCATCTGGCCGGGCGCAGCTACCTGGCGC TGTCCGGCGGCGAACGCCAGCGCGTGCACCTGGCGCGGGTGCTGGCGCAGCTGTGGCCCGGCGAGCCGGGGCAAGTGCTGCTGCTCGACGAACCGACCTC GGCGCTCGACCCGCTGCACCAGCACACCACCCTGCAGGCGGTGCATGATTTCGCCCGCCGCGGTGCCTCGGTGCTGGTGATCCTCCACGATCTCAACCTG GCCGCGCGCTATTGCGACCGCCTGCTGCTGTTGCAGAATGGTCGCCCGCACCTGCTCGGTACGCCCGAGGAAGTCCTGCGCCCCGAGCCGTTGCGCGCGG TGTTCGGCCTCGAGGTCCTGGTCCAGCGTCATCCCGAGCGAGGTCATCCGCTGATCGTCGCCCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGAGTCGCCATGCGCATTCGCCTGTTCGCTTTCTGTCTGCTGCTGGGCGGCTGCCAGTCCCAACTGCCGCCGCTGCCTGACTGGCAGAGTCCGGAAGGG CGCGACGATCCGCAGACGGGACGAATCGTCGAATTGCGCAGCGGCGTGACGCTGAGCCTGCGGCAACTGGTCGCACGCCTGGCGGCCGCGCCGCGAGTGA TCGTCGGCGAGAAGCACGACAATCCCGATCATCATGCCGTGGAACTGTGGCTGGCGCAGGCCCTGGGCGAATACCGGGCGCAGGGCAGCCTGCTGCTGGA AATGCTCGATCCCGGCCAGCAACCACGGGTGGATGCGGTCCGTGCACAACTCGGGACCGGCAAGCCGATGGCGAACCTGGAGCAGGCCCTGGACTGGCAG AAAGGTTGGGACTGGACGCAGTACGGACCCCTGGTGTCCTGGGCGGTTGCGCAACCCGCGCCGTTGCTGGCGGCGAACCTCCAGCGGAGCGAGATCATGC
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| Amino Acid Sequence |
>hemin ABC transporter ATP-binding protein
MLRVENLSIRRGGKTVLEGLELELRPGEMLGVLGPNGAGKSTLLGALCGELEPAEGLVLLDERGLDDWPGVARAQRLAVLPQSSSLGFAFPVEAVVGFGR LPHSSGRERDAQIVAEALAAADASHLAGRSYLALSGGERQRVHLARVLAQLWPGEPGQVLLLDEPTSALDPLHQHTTLQAVHDFARRGASVLVILHDLNL AARYCDRLLLLQNGRPHLLGTPEEVLRPEPLRAVFGLEVLVQRHPERGHPLIVAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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