Pseudomonas aeruginosa CF_PA39, AX20_RS0115965 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa CF_PA39 scaffold18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGCTGTCGGCCCTCGGCGTGGCGTCCCTGCTGAAGGCAGAGCCGATGCTGTTCATCGGCCTGAAGTACCTCGGTGCGGCCTACCTGTTCTATCTCGGC GTCGGCATGCTGCGGGGCGCCTGGCGCAAGCTGCGCAATCCCGAGGCGACGGCGGCGGAGGCCGAACAGGTGGATGTCCACCAGCCGTTCCGCAAGGCGC TGCTGCTCAGCCTGTCGAACCCCAAGGCGATCCTGTTCTTCATCTCCTTCTTCATCCAGTTCGTCGACCCCGGTTATGCCTATCCGGGCCTGTCGTTCCT GGTGCTGGCGGTGATCCTGGAACTGGTCAGCGCCCTTTACCTGAGCTTCCTGATTTTCACCGGTGTGCGGCTGGCGGCCTGGTTCCGCCGGCGGCAACGG TTGGCTGCCGGCGCCACTTCGGGCGTCGGTGCCCTGTTCGTCGGCTTTGGTGTGAAGCTGGCCACCGCAACCCTGTCCTGATTATTGCAACGAGAGTCCC
DNA Sequence for Gene
>AX20_RS0115965 |carB
ATGCCAAAACGTACAGACATAAAGAGCATCCTGATCCTCGGTGCCGGCCCCATCGTGATTGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCCT GCAAGGCCCTGCGCGAGGAGGGCTACCGCGTCATCCTGGTGAACTCCAACCCCGCGACCATCATGACCGACCCGGCGATGGCCGACGCGACCTACATCGA GCCGATCAAGTGGGCCACCGTGGCCAAGATCATCGAGAAGGAACGCCCCGACGCGCTGCTGCCAACCATGGGCGGTCAGACCGCGCTGAACTGCGCCCTG GACCTGGAGCGCCACGGCGTGCTGGAGAAGTTCGGTGTGGAGATGATCGGCGCCAATGCCGATACCATCGACAAGGCCGAGGACCGCTCGCGCTTCGACA AGGCGATGAAGGATATCGGCCTGGCCTGTCCGCGCTCGGGCATCGCCCACAGCATGGAGGAGGCCTACGGCGTGCTCGAGCAGGTCGGCTTCCCCTGCAT CATCCGTCCGTCCTTCACCATGGGCGGCACCGGCGGCGGTATCGCCTACAACCGTGAAGAGTTCGAAGAGATCTGCGCCCGTGGCCTCGACCTGTCGCCG ACCAACGAGCTGCTGATCGACGAGTCGCTGATCGGCTGGAAGGAATACGAGATGGAGGTGGTCCGCGACAAGAAGGACAACTGCATCATCGTCTGCTCCA TCGAGAACTTCGACCCCATGGGCGTGCACACCGGTGACTCGATCACCGTGGCGCCGGCACAGACCCTGACCGACAAGGAATACCAGATCATGCGCAACGC CTCGCTGGCGGTATTGCGCGAGATCGGCGTGGAAACCGGCGGTTCCAACGTGCAGTTCGGCATCTGCCCGAACACCGGGCGCATGGTGGTGATCGAGATG AACCCGCGGGTTTCCCGCTCCTCGGCCCTGGCCTCCAAGGCCACCGGTTTCCCGATCGCCAAGATCGCCGCCAAGCTGGCGGTCGGCTACACCCTCGACG AACTGCAGAACGACATCACCGGCGGCCGCACCCCGGCGTCGTTCGAGCCGGCCATCGACTACGTGGTGACCAAGATCCCGCGCTTCGCCTTCGAGAAATT CCCGAAAGCCGATGCCCGCCTGACCACCCAGATGAAGTCGGTCGGCGAAGTCATGGCCATCGGCCGGACCTTCCAGGAGTCGGTGCAGAAAGCCTTGCGC GGCCTGGAAGTCGGTGCCACCGGCTTCGATCCGAAACTCGACCTGAACGACCCGGAGGCCGACAGCATCCTCAAGCGCGAGCTGACCGTGCCCAGCGCCG AGCGTGTCTGGTACGTCGCCGACGCCTTCCGCGCCGGCAAGAGCGTCGAGGAAGTGTTCGAGCTGACCCGCATCGACGAATGGTTCCTGGTGCAGATCGA GGACCTGGTCAAGGACGAGGAGAAGGTCAAGACCCTCGGCCTGTCCTCCATCGATCGCGACCTGATGTACAAGCTCAAGCGCAAGGGCTTCTCCGATGCG CGCCTGGCCAAGCTGCTCGGCGTCACCGAGAAGAACCTGCGCAGCCATCGCCACAAGCTGAAGGTGCTGCCGGTCTACAAGCGCGTCGATACCTGTGCCG CCGAGTTCGCCACCGACACCGCCTACATGTACTCGACCTACGAGGAAGAGTGCGAGGCCAACCCGTCGAGCCGCGAGAAGATCATGATCCTCGGCGGCGG TCCGAACCGCATCGGCCAGGGCATCGAGTTCGACTACTGCTGCGTGCACGCGGCGCTGGCGATGCGCGAAGACGGCTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACCGACTACGACACCTCCGACCGCCTGTACTTCGAGCCGGTGACCCTCGAGGACGTCCTTGAGATCGTCCGCGTCGAGCAGC CCAAGGGCGTGATCGTCCAGTACGGCGGCCAGACCCCGCTGAAGCTCTGCCGCGCTCTCGAAGAGGCCGGCGTGCCGATCATCGGCACCAGCCCGGACGC CATCGACCGTGCCGAAGACCGCGAGCGCTTCCAGCAGATGGTCCAGCGCCTGAACCTGCGCCAGCCGGCCAACGCCACCGCGCGCAGCGAAGACGAGGCC CTGGCCGCGTCCAAGGCCATCGGTTATCCGCTGGTGGTACGCCCGTCCTACGTGCTGGGCGGGCGGGCGATGGAAATCGTCTACCAGGAAGAAGAACTCA AGCGCTACATGCGTGAGGCGGTGCAGGTTTCCAACGACAGCCCGGTGCTGCTCGACCACTTCCTCAACTGCGCCATCGAGGTCGACATCGACGCGGTATG CGACGGCGAGATCGTGGTGATCGGTGCGATCATGCAGCACATCGAGCAGGCTGGCGTTCACTCCGGCGACTCCGCCTGTTCGCTGCCGCCGTACTCGCTG CCGCAGCACATCCAGGACGAGATCCGCGAGCAGGTCAAGAAAATGGCCCTGGAGCTTGGTGTGGTCGGCCTGATGAACGTGCAGATGGCGGTGCAGGGCG AGGATATCTTCGTCATCGAGGTCAACCCGCGCGCCTCGCGTACCGTGCCGTTCGTCTCCAAGTGCGTCGGCGAGTCGCTGGCCAAGGTCGCCGCCCGTGT CATGGCCGGCAAGACCCTTGCCGAGGTCGGCTTCACCCAGGAAATCATCCCGCCGTTCTTCAGCGTCAAGGAAGCGGTGTTCCCGTTCGCCAAGTTCCCC GGCGTCGACCCGATCCTCGGCCCGGAAATGAAGTCCACTGGTGAAGTGATGGGCGTCGGTGATAGCTTTGCCGAAGCCTTTGCCAAGGCTCAGTTGGGGG CCAGCGAAATCCTCCCGACCGCCGGTTGCGCCTTCATCAGTGTCCGCGAAGACGACAAGCCGTTCGCCGCCCAGGTGGCTGGCGATCTGGTTGCGCTGGG CTTCGAAGTGGTAGCCACCGCCGGTACCGCGCGTGTCATCGAGGCCGCGGGCCTGCCGGTGCGTCGCGTGAACAAGGTGACCGAAGGTCGCCCGCACGTG GTGGACATGATCAAGAACGACGAGGTCACCCTGATCATCAATACCACCGAGGGCCGGCAGTCCATCGCTGACTCCTACTCCATTCGTCGAAACGCCCTGC AACACAAGATCTGCTGCACCACCACCATTGCGGGTGGGCAGGCGATCTGTGAGGCGCTCAAGTTCGGTCCCGAAAAGACCGTTCGGCGTCTGCAGGATCT CCACGCAGGAATCAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTTCCCCATGACCGTCCAGGGCGCCCGCGCCCTGGAAGAAGAAGTGAAGCACCTGAAGGGCGTGCTGCGCCCGCAGATCAGCCAGGCCATCGCCGA AGCGCGTGAGCTGGGCGACCTCAAGGAAAACGCCGAGTACCACGCGGCGCGCGAGCAGCAGGGCATGGTCGAGGCGCGTATCCGCGACATCGAGGCCAAG CTGTCCAACGCCCAGGTCATCGATGTCACCGCCATTCCGCACAGCGGCAAGGTGATCTTCGGCACCACCGTCGACATCGCCAACGTCGAGACCGACGAGA CCGTGACCTACCAGATCGTCGGCGACGACGAGGCGGATATCAAGGGTGGCAAGATCTCGGTGAATTCGCCGATCGCCCGTGCCCTGATCGGCAAGAGCGA GGGCGATGCCGTGCTGGTGAGAACCCCGGGCGGCGACGTCGAGTACGAGATCGTCGAGGTTCGCCATATCTAAGCGCGCCCCGCTGCGCGCAGGCGCGAT
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCAL DLERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEQVGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALR GLEVGATGFDPKLDLNDPEADSILKRELTVPSAERVWYVADAFRAGKSVEEVFELTRIDEWFLVQIEDLVKDEEKVKTLGLSSIDRDLMYKLKRKGFSDA RLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLCRALEEAGVPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEA LAASKAIGYPLVVRPSYVLGGRAMEIVYQEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVCDGEIVVIGAIMQHIEQAGVHSGDSACSLPPYSL PQHIQDEIREQVKKMALELGVVGLMNVQMAVQGEDIFVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGFTQEIIPPFFSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTAGCAFISVREDDKPFAAQVAGDLVALGFEVVATAGTARVIEAAGLPVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKICCTTTIAGGQAICEALKFGPEKTVRRLQDLHAGIKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site