Pseudomonas aeruginosa CF_PA39, AX20_RS0115500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCCACAGTTTCGCGACGCACCGTCGTGGCGCATTCCACAGCGCCTTTTCCCTGGCTCTTTCGCCAATCGGGAGAAATCCTGCGGCCCTGTCCAATGCCT TTCCCCCGACCGCCGAAGGCTTTTTTTCAACGGGGAATGCGAACAGCTTTTCCACAGACAAACCCACAGAAGCGCCAGTTGCCGACCGGGCATTTCGCAA GGCGGATTCAAGGTGCCGGAACGCTTTCCGCGGATCGCCTGCCGGAAGCCAGATGGGCACATCCCGCAATGGCTCGTGCAATCTTTCCGCACACGCGCTA CACACAGACTTATCCACAGCATGCGCACAGTGCATAATGGCGGAAGCGAGATCACGCGCCAAAGACGGGATATTTCCGTCGATTTCCCGGACTAAAGAGG CGAAAGCGCCGTTCCGGCAGCAGAGGAGATGAACGATGCAGTACCTGCTGGCAACTTCGTCCCCCCACTTATTCTGCACTCCGACCACGGCGGGAGCGCG
|
|
| DNA Sequence for Gene |
>AX20_RS0115500
ATGAGCAGTTCGGCCCATCGCGGGCGGATCCTGCATTTCCTCGGCGACCCGGCGAAGCTCGGCGACAAGGCCTGGGAGTATTTCGAGGACGGCCTGCTGT GGATCGAACACGGCCACGTGCGCGCGCTCGATCACGCAGCCTACCTGCTGCCGCGACTGCCCGCCGACCTGCCGCTGGAGGAGCATCCGCAGCGCCTGCT ACTGCCCGGCTTCGTCGACTGCCATGTGCATTACCCGCAACTCGGAGTGATCGCCTCCTACGGCACCCAACTGCTGGACTGGCTGGAAACCCACACCTTT CCCGCCGAGCAGCGCTTTGCCGATGCCGGCTACGCCGCCGCCCAGGCCGAGCTGTTCCTCGACGAACTGCTGCGCCACGGCACCACTACCGCGCTGGTGT TCGGCACGGTCCATGCGGTATCCGCCGAGGCATTCTTCCAGGCCGCGCAGAAGCGCCGCCTGCGGATGATCGCCGGCAAGGTGCTGATGGACCGCAACGC GCCGCCGGCGCTGTGCGATACCGCGGCCAGCGGCTACGCCGAGAGCCGCGCGCTGATCGAGCGCTGGCACGGCAACGGGCGCCTGCAATACGCGGTCACC CCGCGCTTCGCGCCGACCTCCTCGCCCGAGCAACTGGCCGCGGCGGCGCGCCTGCTGGACGAGTATCCCGGCGTCTACCTGCACACCCATCTTTCGGAGA ACCTCAAGGAAGTCGCCTGGGTCGGCGAGCTGTTTCCCCAGGCACAGGATTACCTGGACGTCTATCATCGCGCCGGCCTGGTCGGCGAACGCAGCGTGTT CGCCCATGGCATCCATCTCTCCGAACGCGAATGCCGCTGCCTGGCGCACAAGAAAGCGGCGTTGGCGCACTGTCCCAGTTCCAACCTGTTCATCGGCTCC GGCCTGTTCGACCTTGGCCGCGCCCAGCAATACGGCATCCGCGTCGGCATCGGCAGCGACGTCGGCGGCGGCACCAGCCTGTCGCTGCTGGCCAACCTCG CCGACGCCTACAAGATCCAGCAATTGCGCGGCACCAGCCTCGATCCGTTCCAGGCGCTCTACCTGGCCACCCTCGGCGGCGCCAGGGCGCTCGACCTGGA CGGCCTGGTCGGTAACTTCCTGCCCGGCCGCGAAGCCGACTTCGTCGCCCTCGACCTGGCCGCCACGCCGATGATCGCCCAGCGCATGGAGCATGCGCGC GACCTGGCCGATACCCTGTTCGTGCTGAACACCCTGGGCGACGACCGCGCGGTGGCGGGGACCTGGGTGATGGGGGAGCGGCGCCATGCGAAGGGATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GAGCCTCTCTCCCGCGCGGGCCCGGGCTGTCGCTCCAGGCCACTTCCCCGCCCTTTAGCGAAGGGAGCCGCTCGCACCCAGGCCCCACGCCTTCACGACA CCGCCACCGCCTCCAGGAACCGCTCCAGCACCAGATTCGGCCGGCGTCCCTTGCGGGTCACGATGGTCAGCGCGATGGCGTAGTGGAAACGCTCCGGCAG CAGGGGCCGCAGCATCCCGGCGGCGACCCAGTCGGCGGCGTAATGCGACGGCAGGTAGCCGATGAAGTTGCCGGTCAGGATCAGGAACGCCATGCCCTCG CGGTCCGAGGCGCTGGCGCTGTTGTTCAGCTCCTGGTGGCGCGCCTGGGCTTCGGCGGGCAGGCGGTAGCTGGGCGCGACGGCGTCCGCGGCGAGCACCT CGTCCACCGCGATATCGCCGTCGGCGCGTTCGAACAGTGCGTGGCCGCGGCTGCAATAGAGCTGCGCATGCTCGTCATACAGCGGCAGGTACTCGAGCCC
|
|
| Amino Acid Sequence |
>guanine deaminase
MSSSAHRGRILHFLGDPAKLGDKAWEYFEDGLLWIEHGHVRALDHAAYLLPRLPADLPLEEHPQRLLLPGFVDCHVHYPQLGVIASYGTQLLDWLETHTF PAEQRFADAGYAAAQAELFLDELLRHGTTTALVFGTVHAVSAEAFFQAAQKRRLRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHGNGRLQYAVT PRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYLDVYHRAGLVGERSVFAHGIHLSERECRCLAHKKAALAHCPSSNLFIGS GLFDLGRAQQYGIRVGIGSDVGGGTSLSLLANLADAYKIQQLRGTSLDPFQALYLATLGGARALDLDGLVGNFLPGREADFVALDLAATPMIAQRMEHAR DLADTLFVLNTLGDDRAVAGTWVMGERRHAKG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|