Pseudomonas aeruginosa CF_PA39, AX20_RS0115165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa CF_PA39 scaffold16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCAAGCGGCACACGGTGAACTCCGAGTTCGACATCAAGCAGATCTCCGCGCTGGCTCCGGTGGAAATCGCCTACAGCTACGGCAACGTCAGCGACACCG CCTACAAGGCCCTGGCCCAGGCCGGCGCCAAGGCGATCATCCATGCCGGCACCGGCAACGGCTCGGTGCCCGCGCGCGTGGTGCCGGCCCTGCAGGAACT GCGCAAGCAGGGCGTGCAGATCATCCGTTCCTCGCACGTCAACGCCGGCGGCTTCGTCCTGCGCAACGCCGAGCAGCCGGACGACAAGAACGACTGGATC GTCGCCCACGACCTGAACCCGCAGAAGGCACGCATCCTGGCCGCGGTCGCGATGACCAAGACCCAGGACAGCAAGGAATTGCAGCGGATCTTCTGGGAAT ACTGAGTGAACCTTCCCGGCGCCGCCTGCCGGCCGCGCCGGAAAACCGCCCGTTCCGCCGCCCATCGTGGCGGCGGACTGGCCTAGCCGCGACGACTGTG
DNA Sequence for Gene
>AX20_RS0115165
ATGGAATCCCCCGATCCGCCCTGCGTACCTCCGTCACTGACCGTGAAGCCCCGCCTCGTCCGCCAGCTGCTGCTCCCCATCCCCCTGCTCCTGCTGATGC TCGGCTTCGGCTACGGCGGCTACCGGATCAGCGAGAACGCCGGCATCCGTGCCCTCGCCGAGAATGGCGAGCGCCAGCTGGAGCTGCATGCGCGGACGGT CGAGAGCGAGATCAGCAAGTACACCTACCTGCCCAGCCTGCTGGAGCTGGAGCGCAGCGTCAGCCACCTGCTCACCGACCCGACGCCATACCGCCGCAAC CAGGTCAACGCCTACCTCGAAGGCCTCAACCGCCGCGCCGGCAGCCGCGCGGTGTACCTGCTGGATACCAACGGCCGGGTCCTGGCCACCAGCAACTGGA GCGACCCGGACAGTTACCTCGGCGAGGACCTGTCGTTCCGCGCCTACTGGCAGGACGCGATGAAGGGCAAGCCGGGACGCTTCTACGGCATCGGCAGCAC CCGCGGCGAGCCGGGCTACTACCTGGCCCACGGCCTGGTCCACGGCGGCCGGATCATCGGCGTGGCGGTGGTCAAGGTGAAGATGGACGCCCTCGAGGAA CGCTGGGAGAAGGCGCGCCTGGAAGCCTTCGTCAGCGACGAGAACGGCATCATCATCCTCTCCAGCAACCCCGCCCTGCGCCTGAAGGCGGTGCGCTCCC TGAGCGCCGACGACAAGGAGCGCCTGGCGCGCAGCATGCAGTACTACTGGTGGGCGCTGAACGAGTGGCAGCCGCTACAGCGCGAGCCGCTGGCCGCCGG AGTGGAGAAGCTCAGTTTCCCTGCCGATGAGCAGCATCCGCGCGGCGAAGCGGTCTCCTACCTGGCGCAGACCCGCGCGCTGAACGACACGCCGTGGAAC CTGACCCTGCTCAGCCCGCTGGAAGACCTGCGCCGCGACGCGGTACGCAACGGCATGCTGGCCGCCATCGGTTTCGCCCTCCTGGCATTCCTGCTGATCG CCTGGAACGAGCGGCGCAAGGTACTCGCCACCCGCCTGGCCGCGCGCGAGGCGCTGCAACGTGCCAACGGCGAGCTGGAAGTGAAGATCGCCGAACGCAC CGCCGACCTGCAAGCCAGCAACGCACGCCTGACCGCCGAGATCCACGAACGCCAGCAGGCCGAGGACACCCTGCGCAAGGCCCAGGACGAACTGGTCCAG GCCGGCAAGCTGGCGGTGATCGGACAGATGTCCACCAGCATCGCCCACGAACTCAACCAACCGCTGGCGGCACTGCGTACGCTGTCCGGCAACACCGTGC GCTTCCTCCAGCGCGGCAAGCTGGAGACCGCCAGCACCAACCTCGCCACCATCAACGAACTGGTCGACCGCATGGGCCGCATCACCGCCAGCCTGCGTGC CTTCGCCCGGCGCAGCGACGACGCCGGCCAGGCCAGCCTGGCCAAGGCGGTGGACGCGGCGCTGCTGATCCTGCACGGACGCCTGGAGCAGGACCCGCCG ACCCTGCACCGGCATTTCGACGACGTGCGCCTGGGCATCGACCAGACCCGCCTGGAGCAGATCCTGGTCAACCTGCTGGCCAACGCCCTCGACGCCATGA GCGGCCAGGCCGACCGCCAGCTCTGGCTGGAAGGCCGGCGCGAGGAGGAGCGCTACGTCCTGCGCGTGCGCGACAACGGCCCCGGTATCCCGCCGGCAGC GCGCGTCCATCTGTTCGAACCCTTCTTCACCACCAAGCCCGGCGAACATGGCCTGGGCCTCGGCCTGACCCTCTCGGCCAGCCTCGCCACCGCCGCCGGC GGCAGCCTCAGCGTGCAGCACCCCGAAAGCGGCGGAACCGCCTTCGAGCTGAGCCTGTCCCTGGTTCCCGATTCCCCGACTGCGAGTCCCGCCCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGAGCCGCTTTCCGTCCTGATCGTCGAAGACGATCCGCATGTCTTGCTCGGCTGCCAGCAGGCGCTGGAGCTGGAGGACATCCCCTGCATCGGCGTCGG CAGCGCCGAGGAGGCACTGCAACGGGTCGACCGCGATTTCGCCGGCATCGTCGTCAGCGACATCCGCCTGCCCGGCATCGACGGCCTGACCCTGCTGGAG CGTCTCAAGGCCCTCGACCCGAGCCTGCCGGTGGTGCTGATCACCGGCCACGGCGACATCTCCATGGCGGTACAGGCGATGCATGCCGGCGCCTACGACT TCATGGAGAAGCCTTTCTCTCCGGAACGCCTGGTCGAGGTCGCCCGCCGCGCCCTGGAACAGCGCGGGCTGGCCCGCGAGGTCAGCGCGCTGCGTCGCCA GCTGGCCGGCCGCCAGGATTTGGCGCAACGGATCATCGGCCGCTCGCCGGCGATCCAGGCGTTGCGCGAGCTGATCGCCAACGTCGGCGACACCTCGGCC
Amino Acid Sequence
>histidine kinase
MESPDPPCVPPSLTVKPRLVRQLLLPIPLLLLMLGFGYGGYRISENAGIRALAENGERQLELHARTVESEISKYTYLPSLLELERSVSHLLTDPTPYRRN QVNAYLEGLNRRAGSRAVYLLDTNGRVLATSNWSDPDSYLGEDLSFRAYWQDAMKGKPGRFYGIGSTRGEPGYYLAHGLVHGGRIIGVAVVKVKMDALEE RWEKARLEAFVSDENGIIILSSNPALRLKAVRSLSADDKERLARSMQYYWWALNEWQPLQREPLAAGVEKLSFPADEQHPRGEAVSYLAQTRALNDTPWN LTLLSPLEDLRRDAVRNGMLAAIGFALLAFLLIAWNERRKVLATRLAAREALQRANGELEVKIAERTADLQASNARLTAEIHERQQAEDTLRKAQDELVQ AGKLAVIGQMSTSIAHELNQPLAALRTLSGNTVRFLQRGKLETASTNLATINELVDRMGRITASLRAFARRSDDAGQASLAKAVDAALLILHGRLEQDPP TLHRHFDDVRLGIDQTRLEQILVNLLANALDAMSGQADRQLWLEGRREEERYVLRVRDNGPGIPPAARVHLFEPFFTTKPGEHGLGLGLTLSASLATAAG GSLSVQHPESGGTAFELSLSLVPDSPTASPAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site