Pseudomonas aeruginosa CF_PA39, AX20_RS0112360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGCTCGCTGTCCTTCGGCTTCTCCCAGGCCGATATCGACAGGCTGGTCCCCGGCCGGGAGAAGCGCTCGTGATCCGCCCGCAGGACTGCGAGATCCTG CTGTGGCGCTCGTTCGACGACGAGGCCGCCTTCTTCGCCAGCATGGGCCGCTTCTTCGCCAGCGCCCGGGTGCGCCGCGAATGCGGCGGCTACCCGCTGA GCGACGGTCCCTACCACCGCTGGTTCGTGCTCCGCCGCCAGGGCGACACGCGGATACTGGGGTTCGTCAGCCTGGAGCAACATCCCGACGTGGTTCGCCT GCGCGATGCCTACCTGCGTGCGGAAGCGCGCGGTCGCGGGCTGTTCCGCACCCTGCGCGAGCGGGTCCTCGGGCATGTCGACCAACTCGGGCTGGCCTGT ACCACTCGCGCGCCCCAGGCCTGCGCGCGCCTTCTCGAACCGCACGGGTTCGCCGTGCATTCCACCCGGGGTAGCTGGGTGACGCTCATGAGGAAAGCCC
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| DNA Sequence for Gene |
>AX20_RS0112360
ATGGCACAGACAAAGACACTGACGGAGCGGGCCGAGGCGCTGTTCGGCGAACTGGACGGGTTGCCGCTTGCCGAACGGATTGAAGCCATCAACCGGATCC GCCGGCTGCTCCACGCGCACAGTCCGTTCGCCGAAGAGCCGGTCGATTGCGTGCAGTGGGTGCGTGCCGAGCGCGTTGCCGGCAACGACTACAACCCCAA TACCGTCGCGCCGCCGGAAATGCGGCTGCTGCGGCTGTCCATCGAGTCCGACGGCTTCACCCAGCCCATCGTCGCCTACCCTCAGGCCGACGGGCGCTAC GAGGTGGTCGACGGCTTCCACCGCCTGCGCGTGGGCAGCGCCAAGGGCGCGCTGCGCCAACGTCTGCACGGCTACCTGCCGATCGCCGCGATACGCGCCG GGCGCGAGGGCGACAGCGAGCGCATCGCCGCCACTATCCGCCATAACCGCGCACGCGGCGTGCACGGCGTATTGCCGATGACGGCGATCGTGGTGACCCT GCTCGAGGCCGGCTGGAGCGAGGCCGACGTAGCCCGCGAACTGGGCATGGACAATGACGAGGTGCTGCGTTTCAAGCAGGTATCGGGATTGCCGGGGCTG TTCCGCGATCATGAATACTCGACGTCCTGGGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCGCCCGGAGGAACGGGGCCGGGCACGCCTCAGAGTTCGACAGGCTGCCCGTCCGGGGCGCTGTGGAGGGTCCAGCGGCCGCCGATCATACGCTTTCC GCCGCCGCTATCCGCGCCTCGGCGACCCGACGCAGGCGGTGCATGGACTCCTCCGACTCGCGTTCGATGCGCCGGCGCAGCAGGAACAGGTTGGCCAGGC GCATCGACCAGCCGTCGAAGCGGTATTCCAGGATGCGCACGAAACGGGTGCCGGCCGCGCTCGGCTGGCATTCGTAGCTCAGGCGCAGGTGCAGCCCCCG GTCGCCACGGGCGTTGGCGCGCCAGAGGCGGCCCGGCTGGTACTCGACCACCGTCCAGGACAGGTGCCCGGCGCGGCCGCCGGCGTGGATGTCCTCCTCG AAGCGCGCGCCGGCCGGCAGCGGGCCAGCGGCGCCGTCGACCCGCAACGACGAGGGATGCCATTCCGGCCAGAGCCCCGGGCTGGCGGCGTAGGCGAGGG
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| Amino Acid Sequence |
>hypothetical protein
MAQTKTLTERAEALFGELDGLPLAERIEAINRIRRLLHAHSPFAEEPVDCVQWVRAERVAGNDYNPNTVAPPEMRLLRLSIESDGFTQPIVAYPQADGRY EVVDGFHRLRVGSAKGALRQRLHGYLPIAAIRAGREGDSERIAATIRHNRARGVHGVLPMTAIVVTLLEAGWSEADVARELGMDNDEVLRFKQVSGLPGL FRDHEYSTSWE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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