Pseudomonas aeruginosa CF_PA39, AX20_RS0107545
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCAGCCGCGAGAGTCTGGCGCGCACTGCTTTCCAGCACCTGAAGGTGGGCAGCCGGGTGAACCTGGAAAAGGCCCTGACGCCGACCACCCGCCTCGGCG GACACCTGGTGAGCGGCCACGTCGACGGTGTCGGCGAAGTGCTCAAGCGCGAAGAGAACGCCCGCGCCATCCAGTTCACCGTGCGCGCCCCGTGCGAACT GGCCAGGTACATCGCGCACAAGGGCTCGATCACCGTAGACGGCACCAGCCTCACGGTGAACGCGGTGAGCGGCGCGGAGTTCGAACTGACCATCGTCCCG CATACGCTCAGCGAAACCATCATGGCCGAATACCAGCCCGGGCGCCGGGTCAACCTCGAGGTCGACCTGCTGGCCCGTTACCTGGAACGCCTGCTGCTCG GCGACAAGGCCGCCGAACCCCGCGCCTCCGGCATCAGCGAAGCGTTTCTCGCCGAGAACGGTTTTCTCAAGTAACCCACGAATTGCACAAGGGGGTGCCC
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| DNA Sequence for Gene |
>AX20_RS0107545
ATGGCACTCAACACGATTGACGAACTGATCGAAGACATCCGCCAAGGCAAGATGGTCATCCTGATGGATGACGAGGACCGCGAGAACGAAGGCGACCTGA TCATGGCCGCCGAATGCGTCCGCACCGAAGACATCAATTTCATGGTCAAGCATGCCCGCGGCCTGGTCTGCATGCCGATGACCCGCGAGCGTTGCGAGCG CCTCGGCCTGCCGCTGATGGTGCAGCGCAACGGCTCCGGCTTCGGCACCAAGTTCACCGTCTCCATCGAGGCCGCCGAGGGCGTCACCACCGGCATCTCC GCCGCGGACCGCGCCCGTACCGTGCAGGCAGCGGCGGCGAAGAACGCCGTGGCCGCCGACATCGTCAGCCCCGGCCACATCTTCCCGCTGATGGCCCAGC CGGGCGGCACCCTGGCTCGCGCCGGGCACACCGAGGCGGCCTGCGACCTGGCGCGGATGGCCGGGTTCGAACCCTCCGGGGTGATCTGCGAGGTGATGAA CGACGACGGCAGCATGGCCCGCCGGCCCGAGCTGGAAGCGTTCGCCGCCGAGCACGGGATCAAGATCGGAACCATCGCCGACCTGATCCACTACCGGCTG ATCCACGAGCGCACCGTAGAGCGCATCGCCGAGCAGCCGCTGGACAGCGAACTGGGTCACTTCAACCTGATCACCTACCGCGACTCGGTAGAGGGCGACG TGCACCTGGCGCTGACCCTCGGCAAGGTCTGCGCGGAAGAGCCGACCCTGGTCCGCGTACACAACATGGACCCGTTGCGTGACCTGCTACAGGTCAACCA GCCGGGCCGCTGGAGCCTGCGCGCGGCGATGACCAAGGTCGCCGAGGCGGGCAGCGGCGTGGTGCTGCTGCTCGGCCACCAGATCGGCGGCGACGACCTG CTCGCCCATGTCCGCGAGATCGCTTCGGCACCCGCCCCGGCGCCCAAGGCCACCACCACCTACAGCACCGTCGGTGCCGGCTCGCAGATCCTGCGCGACC TCGGCGTGCGCAAGATGCGCCTGCTGAGTGCGCCGATGCGCTTCAATGCGATATCCGGTTTCGACCTGGAAGTTGTAGAATACCTGCCCGCCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCTGTCCCGCCCGCCGCGTGCAAGATCGCGGCGGGCGCTATGCTGGACGGACCTTTCGACCCTTTTCGCTCGGGGCGCAACGGCGCCCCGGCTCTTTA ACAGATGAGACCTGCTCATGACCCTGAAGACCATCGAAGGTACCTTCATTGCTCCCAAAGGCCGCTACGCCCTGGTGGTCGGCCGCTTCAACAGCTTCGT CGTGGAAAGCCTGGTCAGCGGCGCCGTCGACGCCCTGGTCCGCCACGGCGTGGCTGAAAGCGAGATCACCATCATCCGCGCCCCGGGTGCCTTCGAGATC CCGCTGGTGACCCAGAAGGTCGCCCAGCAAGGCGGCTTCGACGCCATCATCGCCCTCGGCGCGGTGATCCGTGGCGGCACCCCGCACTTCGAATACGTGG CCGGCGAGTGCACCAAGGGCCTGGCCCAGGTGTCCCTACAGTTCGGCATCCCGGTCGCCTTCGGCGTCCTCACCGTCGACTCCATCGAGCAGGCCATCGA
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| Amino Acid Sequence |
>3,4-dihydroxy-2-butanone 4-phosphate synthase
MALNTIDELIEDIRQGKMVILMDDEDRENEGDLIMAAECVRTEDINFMVKHARGLVCMPMTRERCERLGLPLMVQRNGSGFGTKFTVSIEAAEGVTTGIS AADRARTVQAAAAKNAVAADIVSPGHIFPLMAQPGGTLARAGHTEAACDLARMAGFEPSGVICEVMNDDGSMARRPELEAFAAEHGIKIGTIADLIHYRL IHERTVERIAEQPLDSELGHFNLITYRDSVEGDVHLALTLGKVCAEEPTLVRVHNMDPLRDLLQVNQPGRWSLRAAMTKVAEAGSGVVLLLGHQIGGDDL LAHVREIASAPAPAPKATTTYSTVGAGSQILRDLGVRKMRLLSAPMRFNAISGFDLEVVEYLPAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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