Pseudomonas aeruginosa CF_PA39, AX20_RS0107405

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa CF_PA39 scaffold6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTTCTGGGTCAACCTGCTGGAGGTGCCGGCGCGGGAGGACGGCAGCGGCAACCTGCTGCTGTTGAGCTACCGCCTGCGGATGAAGCTCCTGTTCCGTCC GCAGGGTTTGGCGGGCGATCCGCGAACCGCCGCGCGCCAGGTCGTCTGGCGCTTGCGCCCGGCGGTACGGCCAGGAGAGCGGGCGCTGCTGGAGGCGGAC AACCGCAGTCCCTATCACGTTTCCCTGGCGCGCCTGGAACTGGGCGAGGGCGACCTCGCCATGTCCCTCGGCAGCGTCACCTTGCCGCCTTTCGCCCTTA CCCCGTTGAGGCTGCCGGCCGTGCCCGCCGAGGCGGCGCGGGTCCATTTCGATGCGGTGGGGGATGACGGCCAGATCGAGCGCGGCGACGCGCCGGCAGA GAGATACCCGTAGGAGTTCGGCAGGGGCCGGGGAGTTGGGCTCCTGCCGTAGCACGGCCCTGCGAATAGGTTGCGGGGTTTCACTGGAGGAAGGAAGCAC
DNA Sequence for Gene
>AX20_RS0107405
ATGAACAAATGCTATGCACTGGTCTGGAACGCATCCCAGGGCTGCTGGAACGTCGTCAGCGAAGGTAACCGCAGGCGCGGCAAGCCCGCCGGCGCCAAGG CGGTGATCGTCTCCGCCCTGGTCTTGCTGGGCGCCACGGCCATGGATCCGGCCTTTGCGCTGCCAACCGGGGGAACGGTGGTCGGCGGGAGCGCGAACGG GGAGATACACCTGTCGGGCGGCAACAGCATGTCGGTCAACCAGAAGGTCGACAAGCTGATCGCCAACTGGGACTCCTTCAGCGTTGCCGCCGGCGAGCGG GTGATCTTCAACCAGCCGAGCAGCAGGTCGATCGCCCTGAATCGGGTGATCGGCACCAAGGCCAGCGATATCCAGGGTCGGATCGACGCCAACGGCCAGG TCTTCCTGGTCAATCCCAACGGCGTGCTCTTCGGTCGCGGCGCCCAGGTCAACGTCGGCGGCCTGGTGGCTTCCACGCTGGACATCACGGATGCCGAGTT CAACGGCCACTCCTCCAGATACCGTTTCACGGGGCCCTCTACCAACGGCGTCCTCAACCAGGGGGGCACCATCACCGCGGCGGAAGGCGGCAGCATCGCC CTGCTGGGCGCGCAGGTCGACAACCGCGGGACGATCCTGGCGCAGATGGGCGGAATCGGCGTCGGTGCGGGCAGCGACCTGACGCTGAATTTCGACGGCA ACAAGCTGCTCGACATCCGCGTCGACGCTGGGGTCGCCAATGCGCTGGTAAGTAACGGCGGCCTGCTCAAGGCCGACGGGGGGCAAGTCCTGATGGCGGC CAGGACCGCCAGTGCGCTGCTCAACACGGTAGTGAATTCCCAAGGCGCCATCGAGGCCCGTTCGCTGCGCGGCAAGAACGGGCGGATCGTGCTCGATGGC GGCCCGGACGGCAAGGTCACGGTAGGAGGCGCCTTGTCCGCCAATGCGTTGAACGGGCCGGGGCACGGCGGGACGGTCGAGGTCCGGGGCCAGGCGGTGG AGGTGGCCCTGGGCACCCAGGTGAATACGCTCGCCAGCAATGGCCTCAACGGCACCTGGAAGATTGCCGCCGACAAGATCGACGTGCGCCCGTCGGCGTT GTCGGATGGCGCCACCATTCATGCCGACACCCTGTCGCGGAACCTGGCGAGCACCAATATCGAACTGGTTTCGACCAAGGGCGACCTGGATCTCGACGGC TCGGTGAGCTGGGCATCGGGCAACCGGCTGGGATTGGGCTCCGCGGCCGACCTGAAGCTGAATGGCAAGCTGAATGCCAGCGGCGCCAAGGCTGGGCTGG AGCTGAAGGCCGCAGGCGCTATCGATATCAATGACAAGATCGTACTCGGCGGGGCTGGCAGCGCGCTGGCCATGGATGCCGGCGACGGCCACCGGGTCAA CGGCGCGGCGTCGGTCTCCCTGGCCGGGGCCAACGCGACCTACGTCTCCGGCGGCTATTACTACACGGTGGTGCAGACCCTGGCGCAGTTGCAGGCGATC AACAAGAACCTGGACGGCCTGTACGTGCTCGGCGGCAATATCCTGGGAGGCAGCTATTACTGCACTGCGTTGCAGTCCATCGGCGGGCCCGCCGGCGTCT TCAGCGGTACCCTGGACGGTCTCGGCAACAGCATCGGCAATCTCTCGATCAGCAACACCGGACCGAATGTCGGGCTGTTCGCCCGCTCCTCGGGCACCCT GACCAACCTGAAACTGGACAACCTGCGGGTATCCGATAACACCTACGGCTCCGGGCCGTCTTCGCTCGGAGCCTTGGTCGGGATCAACAGCGGCCGCATC GCCAACGTCAGCGCCAGCCGGGTCTCGGTCGCCGGCAGCCGGCTGCGCTCCAACGCACTGGGTGGCCTGGTCGGGCGCAATATCGACGGGCAGATCGCGA ACGCATCCGTCAGCGGCAGTGTCACCGGTTATGCGGCGAGCACGGCGGTCGGCGGCCTGGTGGGGGAGAACTTCACCACCGTCCAGGGGCAGGGGGCGCT CATCGAGAACGCCTACAGCAACGTCCATGTGGCTGCCTTGTCCACCGAGCGCAACAGCCTGGGCGGCGTCGGCGGCCTGGTCGGACTGAATGCGAAGGGC GCGATCAGGGCGTCCGGCAGCCAGGGGAAGGTCGAGACCTTCCGGCCCGGCCTGAACGTCGGCGGCCTGGTCGGCTACAACATGTTCGGCCACGTCTCCG ACAGTAATGCCGGTGGTCTGGTGAGGGCCGGGGGGGCGGGGAATACCGGCGGGCTGGTCGGCCTGAGTTCGGGCGGCGAGATATTCCGTTCGCAGGCGAG CGGGTCGGTGTACAGCAATGGCGGCCTGGCGACCGGAGGGTTGATCGGCAAGGCAGAAGGCAACGGCATGCTCGGAAACCTGAAAGCCAGCGGCAGCGTC ACGGACCAGGGGGGCGCGGATCTGGGCGGGCTGGTCGGCAACAATAGCCAGGGCGCCATCGAGACCGCCGAGGCGACGGGCAAGGTCAGCGGCGGCAGCA ACAGCCGTGTCGGCGGGCTGATCGGATACAACCTTGGCGGCTCCGTCGCCCATGCGATCTCGCGCGGCGAGGTGAGCGGCGGCTTCAACAGCCTGGTGGG CGGGCTCGTCGGCCACAACGGCGGCGAACTGGCCAACGTGGACACCAGCGGTAGGGTCAGCGCCGGTGCGAGTTCGTCGGTTGGCGGCCTGGTCGGCAGC AACGCCGGTTCGATCCTCTCGGCGCGCAGCAGCAGCACCGTCAACGGCGGCGGGCGCAGTCGCATCGGCGGCCTGGTCGGCGAGAACCAGATCCAGGGAC GCATCGTTTCTTCCATGTCGGAAGGCACCGTCGGCGGCGGCTACTACGTCTCCATGGGCGGGCTGGCCGGGGTCAACCTGGGATCGATCGAGTACTCCGG CGTCAGCGGCAAGATCGACTTCAAGCCGCAGTCGTACTACGGCCAGATCTATGGTGCGCAGGTCGGCGAGAACCGCGGGGTGCTGGGCGGCAACTACGTG ATCGGCGAGGCGGCGCTCCTGCCGCCTGCCGGTATCGACTACGGCAACATCTGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCCGGGAAGGGAGGTCCCAGGCGGACCTCCCTTCCCGGCCGGGGCCGCTCTCGCCTGGAGTGCGGCCCTCTTCCGCAGGCGCAACCTTGGAGAGTTCCA TGAGCATGAGGTTATTTCCTGGCCGCGTTTCCATGCGCCGCCGACCTGGCGCGCAGGTTCGGCAGGCGCTCGTTCTCGGCCTCTGCTGCCTGAGCGGCGG CCAGGCCTGGGCCCTGAACGAGATCGCCCTGAACTGCTCGTTCGGCAATGGCAAAGGCATGCCCTGGCGTGTGGTGAACGAGCTGACCAGCAGCACGGCG AAAGGCACGGTGCTGTTCGCCAGGCCGGTGAGTCTGTTCCTGGTCTACAAGAGCCAGGCTTCCCAGGAGCCGCATGAGCTGATCCTGGGGGGGAACTGGT CCGGGGTGGGTTATCCGGGGCCATACGGCACCGTGGCGTCCGACGTCAAAGGCATCGGCTATCGGATCTCGGTGGACGCCCAGGACGGCGTCAAGCGGGT
Amino Acid Sequence
>adhesin
MNKCYALVWNASQGCWNVVSEGNRRRGKPAGAKAVIVSALVLLGATAMDPAFALPTGGTVVGGSANGEIHLSGGNSMSVNQKVDKLIANWDSFSVAAGER VIFNQPSSRSIALNRVIGTKASDIQGRIDANGQVFLVNPNGVLFGRGAQVNVGGLVASTLDITDAEFNGHSSRYRFTGPSTNGVLNQGGTITAAEGGSIA LLGAQVDNRGTILAQMGGIGVGAGSDLTLNFDGNKLLDIRVDAGVANALVSNGGLLKADGGQVLMAARTASALLNTVVNSQGAIEARSLRGKNGRIVLDG GPDGKVTVGGALSANALNGPGHGGTVEVRGQAVEVALGTQVNTLASNGLNGTWKIAADKIDVRPSALSDGATIHADTLSRNLASTNIELVSTKGDLDLDG SVSWASGNRLGLGSAADLKLNGKLNASGAKAGLELKAAGAIDINDKIVLGGAGSALAMDAGDGHRVNGAASVSLAGANATYVSGGYYYTVVQTLAQLQAI NKNLDGLYVLGGNILGGSYYCTALQSIGGPAGVFSGTLDGLGNSIGNLSISNTGPNVGLFARSSGTLTNLKLDNLRVSDNTYGSGPSSLGALVGINSGRI ANVSASRVSVAGSRLRSNALGGLVGRNIDGQIANASVSGSVTGYAASTAVGGLVGENFTTVQGQGALIENAYSNVHVAALSTERNSLGGVGGLVGLNAKG AIRASGSQGKVETFRPGLNVGGLVGYNMFGHVSDSNAGGLVRAGGAGNTGGLVGLSSGGEIFRSQASGSVYSNGGLATGGLIGKAEGNGMLGNLKASGSV TDQGGADLGGLVGNNSQGAIETAEATGKVSGGSNSRVGGLIGYNLGGSVAHAISRGEVSGGFNSLVGGLVGHNGGELANVDTSGRVSAGASSSVGGLVGS NAGSILSARSSSTVNGGGRSRIGGLVGENQIQGRIVSSMSEGTVGGGYYVSMGGLAGVNLGSIEYSGVSGKIDFKPQSYYGQIYGAQVGENRGVLGGNYV IGEAALLPPAGIDYGNIW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site