Pseudomonas aeruginosa CF_PA39, AX20_RS0107135
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGTCGGCTACGCGGCGGTGATGCTGGCGATGATCGGCGCCTTCGTCGTCGCCCTGGATGCCCGCCCGCTGGCCTCGCTGGACGTGACCCGCGACCGT GGGCTGTTCCGCGAGAACGCCGCCGGGCAGATCGAGAACATCTACACCCTCAAGGTCATCAACAAGACCCAGCAGCCGCAGCGCTATCGCCTGCAACTCG ACGACGCGCCGGAGTTCCGCCTACAGGGCGAGCACACCCTGAGCCTGAAGCCCGGCGAGATCCTCGACTTCCCGGTGTCGGTGGCTTCTACCGCCGAACG CGCCAGGGCCGGCTCGCAACCGCTGGCGTTCAGCCTGCGCGGCATCGACGACCCGAGCCTGGCGGTCGGCAGCACCAGCACCTTCGTTTCGCCGGCGCGC TGAGGAGGCCGCGATGAGGCATGACAACACGGTCCCGGCGCGCATAGAGTGGGCGCCAGCGGCCGTGCCCACGGCCAGCCAGGACAGCGGCCAGGACAAG
|
|
| DNA Sequence for Gene |
>AX20_RS0107135
ATGAAGCGCTACGAGAAATTCGCCGACGAGATTGCCGAGCTGATCCGCACCGGCGTCCTCGCCCCCGGGCAGAAGGTGCCCTCGGTACGGCACGCCAGCC GTACCTACGGGGTCAGCGCTTCCACCGTGTTCCAGGCCTACTACCTGCTGGAAAGCCGTGGGCTGATCATGGCCCGCGCACGCTCCGGCTACTTCGTCTG CCAGCACGTGCAGCGGCCGCTGCCGGAGCCGGAGATCAGCCCGCGCCAGGCCGACGCCACCGAAGTCGACGTCAGCGAGCTGGTGTTCTCCGTACTCAGT TCGATCAAGGACCCGGACACCGTTCCCTTCGGCTCGGCGTTCCCCAGTCCGCAACTGTTCCCCCTGCCGCGCCTGGCGCGCTCGATGGCCCACGCGGTGC GCGACATGGACCCGCAGTCGGTGGTCGCCGACATGACGCCGGGCAACCATGGCCTGCGCCGCCAGATCGCGCTGCGCTACATGGTCGGCGGCCTGCTGCT GCCGGTGGAAGAGCTGGTCATCAGCAACGGCGCGCTGGAAGCGCTCAACCTCTGCCTACAGGTGGTCACCCGTCCCGGCGACCTGGTGGCCATCGAGGCG CCGGCGTTCTACGCCACCCTGCAGGTGCTGGAACGGCTGAAGCTGAAGGCGGTGGAAATTCCCGTGCACCCGCGCGAAGGCATCGACCTGGAGGTGCTCG CCGACAGCCTGGAGCGCCTGCCGATCAAGGCCTGCTGGTTCATGAGCAACTTCCAGAACCCGATGGGCGCGAGCATGGACGACGAGAAGAAACGCGCCCT CGCCGAGCTGCTGGCGCGCCACCGGGTGCCGATGATCGAGGATGACGTCTACGCCGAGCTGTACTTCGGCCAGCAGGCGCCGAAGCCGGTCAAGGCCTAC GACCAGGAAGGCCTGGTGATGCATTGCAGTTCCTTCTCCAAGAGCCTGGCGCCGGGCTACCGGGTCGGCTGGGTGGCCGGCGGACGCTACGCCGAGCAGA TCGAGCGACTGAAGCTGATGACCAGCCTGTCGGCGTCGATCCCGGCCCAGGCGGCCATCGCCGATTATCTCCAGCACGGCGGCTACGACCGCCACCTGCG CAAGCTGCGCTATGCCCTGGAGACCCAGCAGAACGCCATGCTCGCGGCGGTGGCACGCTACTTCCCCGAGCAGACCCGGGTCAGCCGTCCCAGCGGCGGC TACTTCCTCTGGCTGGAGTTGCCCGAGGCGGTCGACTCGCTGCGCCTGTTCCAACTGGCCCTGGCCCAGGGCATCAGCCTCGCCCCGGGGCCGATCTTCT CCGCCACCCGCCGCTTCGCCCATTGCGCCCGGCTCAACTACGGGCACCCGTGGAGCGCGCGTCAGGAGAAGGCGATGGAGACACTCGGGCGGATCGCCCA GTCGCTGGCGGGATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGCCCCGCAGACGGAAAGCCACCCCGGCGTAGGGCGGATAACCGCGCGCGGTTATCCGCCCTACGCCGGGGTGGCTTTCCGTCTGCGGGGCGTC
|
|
| Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYEKFADEIAELIRTGVLAPGQKVPSVRHASRTYGVSASTVFQAYYLLESRGLIMARARSGYFVCQHVQRPLPEPEISPRQADATEVDVSELVFSVLS SIKDPDTVPFGSAFPSPQLFPLPRLARSMAHAVRDMDPQSVVADMTPGNHGLRRQIALRYMVGGLLLPVEELVISNGALEALNLCLQVVTRPGDLVAIEA PAFYATLQVLERLKLKAVEIPVHPREGIDLEVLADSLERLPIKACWFMSNFQNPMGASMDDEKKRALAELLARHRVPMIEDDVYAELYFGQQAPKPVKAY DQEGLVMHCSSFSKSLAPGYRVGWVAGGRYAEQIERLKLMTSLSASIPAQAAIADYLQHGGYDRHLRKLRYALETQQNAMLAAVARYFPEQTRVSRPSGG YFLWLELPEAVDSLRLFQLALAQGISLAPGPIFSATRRFAHCARLNYGHPWSARQEKAMETLGRIAQSLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|