Pseudomonas aeruginosa CF_PA39, AX20_RS0106255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCACGGCTACTCCTACTTCATGAATACCCTCTACGACGACGAGGCGGAAAGCGAAGCGCTGATGGAGCTGGCGCGAAGCAAGGTCGGCAATGTCGCCAT CGCCAACTCGGACGCGGCCTGGGATGCCTACGCCCATGCCGCCATCGACCAGGCGGTGCGGGCGGTCCGCGAACTGGGTTGAAGGACGGCGACGGCAGCG GAACCCGCGTTGCCGTCGCCCTCTTCCGAGATCCAGCCAGACTGACAGAAATATACTGACAGCGATCCAACCCATACTCCGCGTAATCCGTTCAAAAGCC CTATGTTTCTCGGCCTCCCCCCGAAATAACCTAAGGAAAACTCACAGGAAATTTCCTACGCATATTCAGAAAAGTCCTGATTAAACCGACAGATACCATC GCTAGAATTCGAACCCGTCCGGAGCTGGCGCCTGCCTGATCCAACAACCGGCCTTACCGGTAGCCGCTGCGAAAACCTCCTTTTCAATCGGGTTCGACTC
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| DNA Sequence for Gene |
>AX20_RS0106255
ATGAAAACACGCGTCATCCTCGTCGACGACCATGCCCTCACCCTGATCGGCATGCGCTATCTCCTGAGTGCGTACGACGACCTACAGGTCGTCGCCCAGG CTCAGGATGCCGACGGCCTGCTGACGCAGCTCGAAGCGCACCCCTGCGACCTGCTGATCACCGACCTGATGATGCCCGACAGCCAGCAGGCCGATGGCTT GCGCCTGGTGCAGAAGGTCCGCCGGCGCTATCCGGACCTACAGCTCATCATCGTCACCATGCTCGGCAACCCGGCACTCATTTCATCCCTGCTCAAGCTC GGCATTCACGGACTGGTAAGCAAGCGCGGCGTGCTCAACGATCTGCCCAAGGCGATCCGTCACACCGGTCGCCGACCATTCATCTCGAGCTCCATCGCTC ACCTCCTGGAAATAGGCGAAGCCGAACACGGCAAGCCATTGGCCAGCCTCGAAGAACTCACCCCGCGCGAAGTGGAGGTGCTGCGCCTGTACGGCAGCGG CCTGGCGGTCGGGGAAATCGCCATCCGCCTGTGCCGCAGCAAGCAGACCATCAGCGCGCAGAAGAGCAGCGCCATGCGCAAGCTCGGCCTGGATACCAAC GCCGGGCTCTACCTGTACATCCAGGAGCACGGACTGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACAGAGCTCGAACCCTGCCTCGGGCAGGCGGCTTCGCGCTCCTTATCGGCCGGTTGGCACTATGCCTCCTGGGCCTGCTGCCCTGGCAGCCAACGAGCGC CGCCGACGCCCCGCCGGCACAGCCGGTCAGCCTGACGCAATTGCTGCGCATGCGCCAGGAACTGCCCGAACGGCCCCTGCGCATCGCCCAGGTGGCATAC CCGCCCGGACAGCAGGAAAGCAATGGCAGCCGGATCCTCAACGGCATCGGCGACGATTACCTGCGACTCATCGGCGAGTTCCTCGACCTGCCGCTGGAGC GCGTCGCCTATCCGTCGGTGGAAGCTTCCTTCGCCGGCCTGCGCAACGGCGAGGTCGACCTGCTGCCGCGCGCCAGCGACTTCGAAAGGCACCTGCCCGG ACTGGTCTTCAGCCATCCGTACCTGAATAGCGCGCCGATCATCATCGGTCGCAGCGACGACCAGAGCCTGCCGCCCGACCTCAAGGGCAAGCGCGTGCTG
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| Amino Acid Sequence |
>LuxR family transcriptional regulator
MKTRVILVDDHALTLIGMRYLLSAYDDLQVVAQAQDADGLLTQLEAHPCDLLITDLMMPDSQQADGLRLVQKVRRRYPDLQLIIVTMLGNPALISSLLKL GIHGLVSKRGVLNDLPKAIRHTGRRPFISSSIAHLLEIGEAEHGKPLASLEELTPREVEVLRLYGSGLAVGEIAIRLCRSKQTISAQKSSAMRKLGLDTN AGLYLYIQEHGLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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