Pseudomonas aeruginosa CF_PA39, AX20_RS0103885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGAATTCGTCGCAGCCGCCATAGGTCAGTTCGTTGGCTTCGATCGCCTGATCGATGAAGCGCAACATGAAAGCGTTCACCGCATCGGCATCCACGCCTT CCTTGTAGTGGAAGTTCAATTCGAAACCCAGCTCCTGGAATTCATCGACGCACAATTTCTTGCGCAGGCGGCGGGAACGATTAGTAGCCATGGCGGCATC TCCTGGATTGACGCTCCATTGGCGGAGCCTCGCATTACAGACAGTAGCCGACACCGCTGGAACCGCGGGCGAACCCGGGCAAGCTCCGCGCGGCGCGGCC GGATTGCCGGCGCACTCTACCAGTTCCGACCATTCGGCGATATGACGACGAACTCCGCGAAACTCCAGCGCATCGTTATCCGCCTTGCGGCATAATGAGC AAGACGGCGTCTTCGCGTGATGCCCGTTTCCTTTTCAGGTTCGCTTCGTTTTTCATCTTCATTTCATTTTCTACCCTCCGTCTTCAAGGGTTCTTCATTA
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| DNA Sequence for Gene |
>AX20_RS0103885
ATGTTCAAGTCGCTGCGTACTCTTGCCTTCGCCACGCTCCTGCCTTTCGCCCTTCCCACCCTCGCCCAGGTCAACGCCACCCTGCCGGCCAACGTGCAGA AAGCCCTGCAGACCAACAAGCTGACCGGCAACGATCTGTCGCTGGTGCTGATTCCGCTCGACGGCCCGGGCAACCCCACCTACTACAACGCGGACGTATC GGTGAACCCGGCCTCGACCATGAAGCTGTTCACCACCTACGCCGCCCTGGAAATGCTCGGCCCGACCTATCAGTGGAAGACCGAGTTCTACACCGACGGC CAGCTCAAGAACGGAGTGCTCAACGGCAACCTCTACCTCAAGGGCGGCGGCGATCCGAAACTGAACATGGAGAAGCTCTGGCTGCTGATGCGCGATCTGC GCGCCAATGGCGTGACCAAGGTCACCGGCGACCTGGTGCTCGACCGCAGCTACTTCAACATTCCGCAGTTGCCGGTATTCAACGACGACGGCGGCGACGA CACCAAGCCGTTCCTGGTCGGCCCGGACTCGCTGCTGGTCAACCTGAAGAGCGTGCGCATGGTGGTGCGCACCGATGGCAACAAGGTCAACGTGCAGATG GACCCGCCGCTGGCCAACGTACGCATCGACAACCAGGTGAAGATGACCGCGCCGGCCACCTGCCCGGCCTGGCCGAAGCTGCGCTTCAGCCCGGTGACCC AGTTCGACGGCACCACCCTGCTGGCCACCGGACAGATTCCTCAGGGCTGTAGCGCGCAGACCTACATGTCGCTGCTCGACCATCCCGGCTACACCGCCGG CGCGGTGCGCGGCATCTGGCAGGAACTGGGCGGCAGCATCCTCGGCAAGGACCGCCAGGGCAGCGTACCGCGTAACGCCACGCTGATCGCCAAGGCCTTC TCGCCAGACCTGGTCGAGATCATCCGCGACATCAACAAATACAGTAACAACACCATGGCCCGGCAGTTGTTCCTCTCCATCGGCGCGCAGTTCCGCAACA GCGCCGACGGCGACGACGCCCAGGCCGCGCAGCGGGTGGTGCGGCAGTGGCTGGCGCGCAAGGGCATCACCGCGCCGCGCCTGGTGATGGAGAACGGCTC GGGACTGTCGCGCCAGGAACGGGTCAGCGCCCGTGAGATGGCGGCGATGCTGCAAGCCGCCTGGCACAGCCCCTATGCACCGGAGTACATCTCCTCGCTG CCGCTGGCCGGCCTCGACGGCACCATGCGCAAACGCCTGCGGCGCACCGCTCTGGTCGGCGAGGCGCACGTGAAGACCGGGACCCTCAACACCGTGCGCG CCCTCGCCGGCTTCAGCCGCGACGCCAGCGGCCACAACTGGGTGGTGGTGGCGATCCTCAACAGCCCGCGGCCGTGGGGCGCTTCGGCGATCCTCGACCA GGTACTACTGAGCCTGCACGCGCAGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACGCAGTACGAAAAAAAAGGCCGCCAGCGGTTGCCCGCCGGCGGCCTTTTGCATGAATGCCGCTCGCCTCAGCGAACGGTGATTCTCCAGGCCCGATGG ATCTTCGGATTACGCGCGAAATCCGGATCGAGGGTTTCGCCAGTGATCTCCTCGACCGCATAGCGGGCCTGCACGCTCTCGTCCAGTTCGAACTTGCGGA AGTTGTTGGAGAAATACAGCACCCCGCCCGGCGCCAGCCGCGCCATGGCCAGGTCGAGCAGTTCGACGTGGTCGCGCTGCACGTCGAACACACCTTCCAT GCGCTTGGAGTTGGAGAAGGTCGGCGGGTCGATGAAGATCAGTTCGTACTGGCCATCGTCCTCCCGCAACCATTCCATCACGTCGCCGTGCACCAGGCGC TGCTTGTCGGAAAAGCCGTTGAGCGACAGGTTGCGCCGCGCCCAGTCCAGATAGGTCTTCGACAGGTCGACGCTGGTGGTGCTGCGCGCGCCGCCCCTGG
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MFKSLRTLAFATLLPFALPTLAQVNATLPANVQKALQTNKLTGNDLSLVLIPLDGPGNPTYYNADVSVNPASTMKLFTTYAALEMLGPTYQWKTEFYTDG QLKNGVLNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVTKVTGDLVLDRSYFNIPQLPVFNDDGGDDTKPFLVGPDSLLVNLKSVRMVVRTDGNKVNVQM DPPLANVRIDNQVKMTAPATCPAWPKLRFSPVTQFDGTTLLATGQIPQGCSAQTYMSLLDHPGYTAGAVRGIWQELGGSILGKDRQGSVPRNATLIAKAF SPDLVEIIRDINKYSNNTMARQLFLSIGAQFRNSADGDDAQAAQRVVRQWLARKGITAPRLVMENGSGLSRQERVSAREMAAMLQAAWHSPYAPEYISSL PLAGLDGTMRKRLRRTALVGEAHVKTGTLNTVRALAGFSRDASGHNWVVVAILNSPRPWGASAILDQVLLSLHAQK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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