Pseudomonas aeruginosa CF_PA39, AX20_RS0100380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa CF_PA39 scaffold1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGCTGCGCAGCAGCGCGGAGATTTCGTCGCGGCTGGCGTTCAGCTGCGGCATGCCGTCGGCGCCCGGCTCGCCGAGCAGACGGGTGCTGTTGGCCAGGC CGTGGACCACCGTCAGCGGATACTCCAGCTCGCGCTGGATCTGGCTGACCTGGGCGCGGGCCAGGGCCACCAGGCGCTCGTTGATGACCTTCTCCAACAG GCCCTGGGTGCGTTGCTGCACCAGTTCCTGGGTTCGCGCGCCGGCGAACAGGGCGTACAGCACCAGCACCACGACCACGCTTAGAACGCTGGCGCCGGCG AGGACGGCGACAGAAAACTGGATCGACTTGAGCTTCATGATGGGACTTCTGACCCTTGTTGGAATTGTCTCTGAGGAGCTTATCGGCAGGAGGACGGCAA ATCCTTAATCGGCTGTCGGAGATTTCCTCGCCAACGGCTGTTGCCGGCGTTCGAGGCGCGGCCTACCATGCGCTCGGCCTTCAGAGGAGAACAAAGGACC
DNA Sequence for Gene
>AX20_RS0100380
ATGGCTCATCCCTTCCGATTCGCCACCCTCGCCGGCGCGCTGCTGCTCGCCGGTTGCCAGGCAGTGAACACCACCAGCGGCGGCGCCGTTGGCGTCGACC GCAAGCAATACATGTTCAGCATGCTGTCCAGCCAGGAAGTCGACCAGATGTACGCCCAGTCGTACCAGAAGACCCTCGGCGAGGCGAAAAGCGCCGGTGT GCTCGACACCAGCAGCGCCGACGCGCGGCGGGTCAAGGCGATCGCCCAGCGGCTGATCCCGCAGACCGCCGCCTTCCGCCCGGACGCCACCAGCTGGAAC TGGGAAGTCAACGTGGTGAAGAGCGACGAGCTCAACGCCAACTGCGGCCCCGGCGGCAAGATCATTTTCTACACCGGGCTGATCGACAAGCTGAAGCTCA CCGACGACGAGATCGCAGCGGTGATGGGCCACGAGATCGCCCACGCCCTGCGCGAGCATGGCCGCGAGGCCATGTCCAAGGCCTACGGCGTGCAGGTGGC CAGCCAGATCGGCGCCCTGGCCGGCCTCGGCCAGGAAAGCCTGCAACTGGCCAATACCGGCGTCGAGTACCTGATGACCCTGCCCAACAGTCGTGCCAAC GAGAACGAAGCCGACCTGATCGGCCTCGAGCTGGCCGCCCGCGCCGGCTACAACCCGGAAGCGGCGATCACCCTCTGGCAGAAGATGGGCAGGGCCAGCG GCGGCGCCAGCCAGCCCGAGTTCACCAGCACCCACCCCTCCGACAGTTCGCGGATGGCCAATCTCCAGGCCGCGATTCCCAAGGTGATGCCGCTGTACCA GCAGGCCAGGCGCGGCAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCAGGGCGCGCGGTCGCGGGGGGCGGCCGGCGCGCCGACAGGCTTACCATCGGAAACGCCTGTTGTGTATTTCCGTAACCTGCTGTTTGGTATCTCGC CGGTGTTCGGCCTAGACTGCTGGCCGACCCGCTTGCGGGACCCGTGGACGAACAGCCACTCTCACGCCCTGGAGCTCATGTGAAATACGCCGTACTCGGA GCCACCGGCCTGCTGGGACATCACGCCGCGCGAGCCATCAGGGCTGCCGGTCACGATCTGGTGCTGATCCACCGTCCTTCTTCGCAGATCCAGCGTCTCG CCTACCTGGAGCCCGAGTGCCGGGTCGCCGAGATGCTCGACCACGCCGGCCTGGAGCGCGCCCTGCGCGGCCTCGACGGGGTGATCTTCAGCGCCGGCTA CTATCCTTCGCGGCCGCGCCGCTGGCAGGAGGAAGTGGCCAGCGCGCTGGGCCAGACCAACCCGTTCTATGCCGCCTGCCTGCAGGCCAGGGTGCCGCGC
Amino Acid Sequence
>peptidase M48
MAHPFRFATLAGALLLAGCQAVNTTSGGAVGVDRKQYMFSMLSSQEVDQMYAQSYQKTLGEAKSAGVLDTSSADARRVKAIAQRLIPQTAAFRPDATSWN WEVNVVKSDELNANCGPGGKIIFYTGLIDKLKLTDDEIAAVMGHEIAHALREHGREAMSKAYGVQVASQIGALAGLGQESLQLANTGVEYLMTLPNSRAN ENEADLIGLELAARAGYNPEAAITLWQKMGRASGGASQPEFTSTHPSDSSRMANLQAAIPKVMPLYQQARRGK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site