Pseudomonas aeruginosa PACS2, A0K_RS17585

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30204
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00422 merrmega3 IPR000551 MerR-type HTH domain 19 89 5.3E-9
FunFam G3DSA:1.10.1660.10:FF:000003 MerR family transcriptional regulator - - 14 118 6.4E-63
CDD cd04765 HTH_MlrA-like_sg2 - - 19 93 3.00296E-39
Gene3D G3DSA:1.10.1660.10 - - - 14 118 4.4E-23
PANTHER PTHR30204 REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXR IPR047057 MerR transcriptional regulator 16 117 1.2E-14
SUPERFAMILY SSF46955 Putative DNA-binding domain IPR009061 Putative DNA-binding domain superfamily 17 113 1.6E-20
Coils Coil Coil - - 99 118 -
Pfam PF13411 MerR HTH family regulatory protein IPR000551 MerR-type HTH domain 19 87 7.7E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.