Pseudomonas chloritidismutans AW-1, F753_18890
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_61_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGACCGCCGAAACTGAAGGCGGTGGACGATCTGCTGCGCCAGCAGCGTGTGCAGCTGGGCAATCGCGTCGCGCCCTCGACCAGGGAAGGCATTCTCAG CGTCATCAAGGAGGTTCGGCGCGGTGGTGCGGTGGGTATTCCGGCGGACCCGGAGCCGAGCGAAGGCAGTGGCATCTTTGTGCCCTTCTTCGCCACCCAG GCGCTGACCAGCAAGTTCGTGCCCGGCATGCTCGCCGGCGGCAAGGCGGTTGGGGTGTTCCTTCATGCATTGCGTCTGGAGGACGGTTCGGGCTACAAGG TCGTCCTCGAGGCCGCACCCGAAGGGATGTACAGCGAAGATGCGGAAACTGGCGTAGCGGCGATGAGCGCAATGATCGAGAAGTATGTGCGCGCCTATCC CAGCCAGTACATGTGGACCATGAAGCGCTTCAAGAAACGCCCCGCCGGCGAGAAGCGCTGGTACTGATCAGGCTCAAACAACAACAACAGGGACGAGCGC
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| DNA Sequence for Gene |
>F753_18890
ATGCAAAACCAGAGACAGCATCCGCGTACCAACATGAAGTGCCGCATCCGCATTGCGCATCCGGCCTTTGGCGAGGTCTTCGCGCAGACCCGTGATCTAT CCGATGGTGGCGTCTACGTCCGGCATCCGGAGCTGGTGGTGCTGCATCCCGGCGACGAGGTGACCGGCCAGGTCCAGGCCCTGCCGATTCCGGCGCCGGA ACTGCGAATGGTGGTGATGCGGGTGGATGCCGAAGGGGTCGGCCTGCAGTTCGTGCACGAAACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCTGGCCGCGGCGCGCCGGTTCAGTCGGGCGTCAGCCGGTCGAGCCGGCGCAGGAATACGGTCATTTCCTTTTCCGCCTGCTTGTCGCCCTGGGCGTT CGCCGCGGCGATTCCGCGCTCCCACGTCTGATGGGCGCCGGGCTTGTCGCCGTCGGCCTGCAGCGCCTTGCCCAGCAGTTTCCAGGCAGCGGAGTATTTC GGATCGAGTTCGACGCAGCGGCGCAGGTGCTCCGCCGCCCGCCCCGGCTGCCCGGCATCCATGTAGCCCTTGCCGAGGCCGAAACGCAGCATCGGATTGT CCATGCCTTGGGAAAGCATCTTTTCCAGCGATTCGAGCATCTTGAAGACCTTTTCGGTGCAGCGCTCCGGGGCGTTTCCTCACTTTAGTGCATCGCCGCC GTCGGGCAATAGCGGCAGCATACGCCATTGGTCTTAGCTGTTGCGGGGCGTTCGCCGTCTTCGTGTGGGCTGGGTTGCAAGCGGCTCAGTGGGCCTCGTT
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| Amino Acid Sequence |
>pilus assembly protein PilZ
MQNQRQHPRTNMKCRIRIAHPAFGEVFAQTRDLSDGGVYVRHPELVVLHPGDEVTGQVQALPIPAPELRMVVMRVDAEGVGLQFVHET
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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